AMCG00008156


Basic Information

Item Value
gene id AMCG00008156
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44034386 ~ 44036127 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008156
ATGGAGACAGACAAAGGGACAAATTTGATGGAGGCCACCGAGAACGGGATAACAACCAAGGCCCTTCACGTCTCTCGGAAGAAAGGCAAAGTCAGTTAtctgaggagaggaggagagaacgCGATGGTGCACATGGAAGGCCATGGGATAGAAACCAGGGTAAACCTTGGAGCAGAGATCGTGAATgggacagaaacagagagagagacagggagactgACCGGAGCAGAGGAAGAGACTGGGAAAGGCATAGAGACAGAGAAGGGGATGGGGACAGGAAGAGAGACCGAGATCGTGACAGAGAccgagacagagaaagagacagaggcagGGAACGAGAGGCGGACAGGCGGGACCATGACCGAGACAGAGCAAGGAACAGAGACCGAGATCGGGACCGGGATCGGGATCGTGACAGAGACCGAGACAGAAGACGTGATCGGGATCGGTCCAGAAGCAGAGACAGAGATCGTGGAAGAGATCGGGACAGAGACCGCACAAGGGACAGAGACCGAGACAGGGACAAGGATAGGGACAGAGAAAAAGACCGAGATAGAAGGGATAGAAGCAAGAGCAAAGACAAGAGCAAAGACACCAAACCTGAAGCTCCGAAGGAGACTGAAAAACCTGCCGAAACAGAGACTCCTTCTGACAAGAACACAACATCCTAAACAGGATTCATGGAATGGATTTGAAGCCCAGAAAGCATCTGCTTTGAAGAATGACAAAAATGTGTCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008156 True 738 mRNA 0.52 2 44034386 44036127

Neighbor

gene id symbol gene type direction distance location
AMCG00008155 NA coding upstream 46 44001734 ~ 44034340 (+)
AMCG00008154 NA coding upstream 34553 43976301 ~ 43999833 (+)
AMCG00008149 LOC106572085,LOC107705722 coding upstream 141288 43854025 ~ 43893098 (+)
AMCG00008150 eef1a2,LOC108429306,LOC107724190,LOC107551525,LOC107705720 coding upstream 338822 43678115 ~ 43695564 (+)
AMCG00008145 id1 coding upstream 370678 43662564 ~ 43663708 (+)
AMCG00008153 NA coding downstream 4651 44040778 ~ 44044810 (+)
AMCG00008157 NA coding downstream 70328 44106455 ~ 44131719 (+)
AMCG00008160 NA coding downstream 223848 44259975 ~ 44268323 (+)
AMCG00008167 NA coding downstream 541245 44577372 ~ 44653905 (+)
AMCG00008162 cdh4,LOC106571924 coding downstream 629509 44665636 ~ 44683700 (+)
G28862 NA non-coding upstream 138435 43894109 ~ 43895951 (+)
G28678 NA non-coding upstream 833183 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 913605 43109050 ~ 43120781 (+)
G28548 NA non-coding upstream 1412229 42621950 ~ 42622157 (+)
G28527 NA non-coding upstream 1447718 42584232 ~ 42586668 (+)
G28931 col9a3,LOC106571930 non-coding downstream 17838 44053965 ~ 44056608 (+)
G28956 NA non-coding downstream 655414 44691541 ~ 44749908 (+)
G28991 NA non-coding downstream 732550 44768677 ~ 44816663 (+)
G28995 NA non-coding downstream 759797 44795924 ~ 44798463 (+)
G29148 NA non-coding downstream 1317589 45353716 ~ 45354079 (+)
AMCG00008132 NA other upstream 728856 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 878314 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 926144 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 1597158 42413632 ~ 42437228 (+)
G28395 NA other upstream 2041009 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 987021 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 1111270 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 1304447 45340574 ~ 45343914 (+)
G29183 NA other downstream 1404386 45440513 ~ 45441064 (+)
G29353 NA other downstream 2231764 46267891 ~ 46268327 (+)

Expression


Co-expression Network