AMCG00008163


Basic Information

Item Value
gene id AMCG00008163
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44776653 ~ 44778533 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008163
ATGGACGTCTTCCCTGACATTATGGACGTAAAGAACGGGACAGAAGCATTTGGAAAGCATGCACATGTGCAGGACCGGCGTTATCCAGTGTTGTGCACCATACTGCTCTTGTTCCTGGTGGCTCTCCTGGTCGTGGTGACCGTTTTGGGAAACGCGCTGGTGATGCTGGCTTTCGTGGTGGAGAAGAGTCTCCGCACCCAGAGCAACTTCTTCTTGCTCAACCTGGCGATTTCTGATTTTTTAGTAGGAGCATTTTGCATGCCCCTGTACGTCCCCTACTTGCTCACAGGGCGATGGTCTTTTGAGAAGAGTCTCTGCAGGCTGTGGCTGGTGATGGATTATCTGATGTGCACCTCTTCTGTGTTCAACATCGTCCTCATCAGTTACGACCGCTTTCTGTCAGTCACTCGACCAGTTGCATACAGGACCCAGCAAGGCAAGGTGTCTCAGGCTGTAGCAAAGATGGCTCTCGTTTGGTTTCTGGCTTTCTTGCTGTATGGTCCTGCTATCATTGCCTGGGAGCACATCGCCGGGCACAGCATTGTGGGAAACGAACAGTGCTACCCTGAGTTCTACTTCAACTGGTATTTCCTCATCACGGCATCCACTGTGGAGTTCTTCATGCCCTTCATCAGCGTGACCTTCTTCAACGTGAGCATCTACCTCAGCATCCGCTGTCGTGCCCGCAGCCGCAAGAAACTGGTCAAGGAGATGACAGGTGGGCCAACGGTTCAGGGCAGAGGAGCCACCCTGGACCATCTCTTGAAAGCAGTGGTGATGGTAGTGGGACTGGAGGGCCAGACTCACCTCATCAAACCCAGTGCCGAGACCCCGTCAGCCCCAGACACTAGAGAGTGCGCTGCTGGCGAGACCACCCAGACTCCAGCCTGCTCGGAGAACCATGTGGAAACTTTTTCGCCCACCAGTGCACAGCAATCCAGGCTGCAAAGAGACAAGAAGGTGGCCAAATCCCTGGCCATCATCGTCTGCACATTCGGAGTCTGCTGGGCTCCCTATACTTTGCTTATGATCATCCGTGCAGCTTGTAACGGCCAGTGTGTCCCCACATATTGCTACGAAGTTTCCTTCTGGCTGCTGTGGCTAAATTCAGCCATAAATCCTTTCCTCTATCCGCTGTGCCACAAAACCTTCAGGAAGGCCTTCAAAAAGATGCTTTGTTCAATGAaattcaattcattttaa

Function

GO: NA

KEGG:

id description
K04151 HRH3; histamine receptor H3

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008163 True 1203 mRNA 0.52 3 44776653 44778533

Neighbor

gene id symbol gene type direction distance location
AMCG00008165 psma7,LOC106571922 coding downstream 24195 44749090 ~ 44752458 (-)
AMCG00008164 NA coding downstream 35738 44721739 ~ 44740915 (-)
AMCG00008158 NA coding downstream 693805 44073663 ~ 44082848 (-)
AMCG00008159 col9a3 coding downstream 704668 44044933 ~ 44071985 (-)
AMCG00008151 LOC106519038,LOC106571933,LOC103357347,LOC104951675 coding downstream 804353 43962078 ~ 43972300 (-)
AMCG00008166 NA coding upstream 203 44778736 ~ 44786186 (-)
AMCG00008174 NA coding upstream 17393 44795926 ~ 44814080 (-)
AMCG00008173 NA coding upstream 73756 44852289 ~ 44872215 (-)
AMCG00008172 NA coding upstream 100477 44879010 ~ 44883212 (-)
AMCG00008175 NA coding upstream 172865 44951398 ~ 44963177 (-)
G28976 NA non-coding downstream 88478 44682437 ~ 44688175 (-)
G28978 NA non-coding downstream 94884 44681425 ~ 44681769 (-)
G28977 cdh4,LOC101161393 non-coding downstream 96611 44679816 ~ 44680042 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding downstream 110076 44666343 ~ 44666577 (-)
G28973 NA non-coding downstream 289234 44487210 ~ 44487419 (-)
G29081 NA non-coding upstream 255912 45034445 ~ 45036413 (-)
G29170 NA non-coding upstream 575274 45353807 ~ 45354086 (-)
G29182 NA non-coding upstream 641057 45419590 ~ 45420462 (-)
G29192 NA non-coding upstream 683246 45461779 ~ 45462530 (-)
G29206 NA non-coding upstream 711474 45490007 ~ 45490890 (-)
G28970 NA other downstream 358457 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 1193240 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 1656489 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 2011999 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 2375579 42359900 ~ 42401074 (-)
AMCG00008192 NA other upstream 370968 45149501 ~ 45228504 (-)
G29301 NA other upstream 1272162 46050695 ~ 46054346 (-)
G29361 NA other upstream 1702413 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 2801606 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 2888109 47666642 ~ 47918462 (-)

Expression


Co-expression Network