AMCG00008166


Basic Information

Item Value
gene id AMCG00008166
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44778736 ~ 44786186 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008166
TGGAAATGGCTCTGTGATTGTTACAGACTGATTTCCATGTCTCAAAGAGAAGCAGACTTACATTGGCAATGAATAAGGCAAGCGGAGGCATATATCCTTATTGCCACTTTTATGGATGTTGTGAATCCAGTACCTTCTGTATAGAGGACTGTATACCAAAGTCCAGGTATACTAAACCTGTGTGATCAGCACTGTCCTCTATGGAAGGGAGTCCTGGACGACTCGCACACGCCAGGAAAGACGGCTGAGCGAAAAAGCAAGCAAGAATGAGCGAAatagagagggggagggggggcagagagagcaggacttCAGTCAGTAAGGAGGGATCTGGGAGAAGCAGAGGGAGAGCAGAAAGATGAAGCTGAAGtaaggagggagaggaagatgAGGCAGAGGGAGAGCTGGAAGAGCAAGAGTGGGAGCCAGGGATTGAAGAGCAGCACACTGGGCACAAGTCCAGTAGGAATCACGGATGAGGCCAACACCAAGCTGCGCGCAAAACCCACCGCATCCTCATTGGCAGATAAAGCTGGGCTGCTGAGCCAGGCGGATACAGGTTATCCATTGGTGGACACGGCACGCATTGTCCAGTGCTGTGTGATGCTGGATATCTAG

Function

GO: NA

KEGG:

id description
ko04614 Renin-angiotensin system

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008166 True 618 mRNA 0.51 3 44778736 44786186

Neighbor

gene id symbol gene type direction distance location
AMCG00008163 NA coding downstream 203 44776653 ~ 44778533 (-)
AMCG00008165 psma7,LOC106571922 coding downstream 26278 44749090 ~ 44752458 (-)
AMCG00008164 NA coding downstream 37821 44721739 ~ 44740915 (-)
AMCG00008158 NA coding downstream 695888 44073663 ~ 44082848 (-)
AMCG00008159 col9a3 coding downstream 706751 44044933 ~ 44071985 (-)
AMCG00008174 NA coding upstream 9740 44795926 ~ 44814080 (-)
AMCG00008173 NA coding upstream 66103 44852289 ~ 44872215 (-)
AMCG00008172 NA coding upstream 92824 44879010 ~ 44883212 (-)
AMCG00008175 NA coding upstream 165212 44951398 ~ 44963177 (-)
AMCG00008176 LOC103370837,LOC107750885 coding upstream 185154 44971340 ~ 44983745 (-)
G28976 NA non-coding downstream 90561 44682437 ~ 44688175 (-)
G28978 NA non-coding downstream 96967 44681425 ~ 44681769 (-)
G28977 cdh4,LOC101161393 non-coding downstream 98694 44679816 ~ 44680042 (-)
G28974 LOC101069589,LOC106525190,LOC104949831 non-coding downstream 112159 44666343 ~ 44666577 (-)
G28973 NA non-coding downstream 291317 44487210 ~ 44487419 (-)
G29081 NA non-coding upstream 248259 45034445 ~ 45036413 (-)
G29170 NA non-coding upstream 567621 45353807 ~ 45354086 (-)
G29182 NA non-coding upstream 633404 45419590 ~ 45420462 (-)
G29192 NA non-coding upstream 675593 45461779 ~ 45462530 (-)
G29206 NA non-coding upstream 703821 45490007 ~ 45490890 (-)
G28970 NA other downstream 360540 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 1195323 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 1658572 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 2014082 42761004 ~ 42764654 (-)
AMCG00008104 samd10 other downstream 2377662 42359900 ~ 42401074 (-)
AMCG00008192 NA other upstream 363315 45149501 ~ 45228504 (-)
G29301 NA other upstream 1264509 46050695 ~ 46054346 (-)
G29361 NA other upstream 1694760 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 2793953 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 2880456 47666642 ~ 47918462 (-)

Expression


Co-expression Network