AMCG00008167


Basic Information

Item Value
gene id AMCG00008167
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44577372 ~ 44653905 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008167
ATGTGGAAACATACACGCTATGGTTTTCAGACGGATGGGAAGTTATATGGGAACTGGTCCTGTGCCAAGCCTCAGACCAATGGAGGATtgGTAATGAAGGAGCGGAGAGAAATCCATTTAGATAGGGAGCAGCTGCGTTTAACAATGAAATTCAACGACTGCCAAGAGAACAAGGATGTTGGGTTTGAGAGCAGCGACCCGAACTTCAACGTGCGGACAGATGGCTCGATCTACACCGAGCACGGGGGCGCCAACCTGTCGGAGCCAGTCCAGTTCATGGTGACTGCCAAGAGAATGCCAGACAAACAGATGTGGGAGACGACCGTCAAACTGGCCTTGGTGGGACAAGCAAGGCCTTGGACTACTGCAGGCCAGCTAATAGGGAAAGAGAAGACACCCCCAGAGTCAGATCCGCAGCCGAGCGTTACCCTGTTTCCGTGGAAACAACAGCCGAGCTCTAATGGGCTGCGACGACAGAAACGAGATTGGGTCATCCCACCAATCAATGAGCCAGAAAATTCCAGAGGGCCCTTCCCCCGCATGCTCGTCAGATGTCCTCTACCTTCTGGCCATTGTCACTTCTGCTGTCAGCAGCCAGCCACGTCTAACCTGTGGGGATGTTCATCCCGGTGCCTGGTCATCCCCACAGACCTCGGGCTGAAACCATTCAGGGCTGCTGCCGCTGATGTCTGTCCTACTATCCGCTCAGACCAAGACCGAGAGATCCAGATCCGCTACAGCATTACGGGGGTGGGCGCAGACCAGCCCCCAATGGAGGTGTTCACCATCGATCCGGTGGCGGGGAAAATGTACGTTACCAAACCTTTGGACCGAGAAGAAAGAGCATCCTATCACCTGAGGGCCCACGCTGTGGACATGAATGGCAACAAGGTGGAGAACCCCATCGACCTCTATATCTATGTCATAGACATGAATGACAACCGGCCAGAGTTTCACAATCAGGTCTACAACGGATCTGTGGATGAAGGATCCAAACCAGgCTCCTACGTCATGAAGGTGACCGCGAATGATGCGGACGATGATACCACCGCCAACGGAATGGTCCGCTACAGGATTTTGTCCCAGTCTCCTCACAGTCCCATCCCCAACATGTTCACCATCAACAGTGAGACGGGAGACATTGTCACAGTAGCGGCTGGACTAGATAGAGAGAAGGCAACCTGCATTGATACCAATTGGGCCATGCTGCAAGGGTCACAACAAGACATCTTCAGGAAAGTCTCCCAGTACACCGTCATCATTCAAGCCACCGACATGGAAGGCAATCTGAACTTTGGGTTGTCCAACACCGCCACCGCCATTATCTCTGTGACAGACGTCAACGATAACCCTCCGGAGCTGACCGCCAGTACAGAGCACAGGAGCATGCAGGCAGGCAGCAGCATCCTGGTGATAGCAGGGAATGAGAAAACTCAAAAGGTAATTTGTTATTGTGATGGATTAAATGAGACAGGCGGCCATGCCTGGCAAGCGACTCGAACGCTTACCCTCCTGAGGGGCACCAGGGCCGGGAACAACAGAGCGGTGCGTGTGAGGGGAGTGGTGGGGGGCGAGAGCGAGGCCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008167 True 1587 mRNA 0.54 11 44577372 44653905

Neighbor

gene id symbol gene type direction distance location
AMCG00008160 NA coding upstream 309049 44259975 ~ 44268323 (+)
AMCG00008157 NA coding upstream 445653 44106455 ~ 44131719 (+)
AMCG00008153 NA coding upstream 532562 44040778 ~ 44044810 (+)
AMCG00008156 NA coding upstream 541245 44034386 ~ 44036127 (+)
AMCG00008155 NA coding upstream 543032 44001734 ~ 44034340 (+)
AMCG00008162 cdh4,LOC106571924 coding downstream 11731 44665636 ~ 44683700 (+)
AMCG00008161 lsm14a,lsm14b,LOC105018105 coding downstream 89725 44743630 ~ 44748571 (+)
AMCG00008169 ss18l1 coding downstream 99140 44753045 ~ 44760831 (+)
AMCG00008168 NA coding downstream 112240 44766145 ~ 44770112 (+)
AMCG00008170 NA coding downstream 119163 44773068 ~ 44774474 (+)
G28931 col9a3,LOC106571930 non-coding upstream 520764 44053965 ~ 44056608 (+)
G28862 NA non-coding upstream 681421 43894109 ~ 43895951 (+)
G28678 NA non-coding upstream 1376169 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 1456591 43109050 ~ 43120781 (+)
G28548 NA non-coding upstream 1955215 42621950 ~ 42622157 (+)
G28956 NA non-coding downstream 37636 44691541 ~ 44749908 (+)
G28991 NA non-coding downstream 114772 44768677 ~ 44816663 (+)
G28995 NA non-coding downstream 142019 44795924 ~ 44798463 (+)
G29148 NA non-coding downstream 699811 45353716 ~ 45354079 (+)
G29153 NA non-coding downstream 724106 45378011 ~ 45378353 (+)
AMCG00008132 NA other upstream 1271842 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 1421300 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 1469130 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 2140144 42413632 ~ 42437228 (+)
G28395 NA other upstream 2583995 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 369243 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 493492 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 686669 45340574 ~ 45343914 (+)
G29183 NA other downstream 786608 45440513 ~ 45441064 (+)
G29353 NA other downstream 1613986 46267891 ~ 46268327 (+)

Expression


Co-expression Network