AMCG00008170


Basic Information

Item Value
gene id AMCG00008170
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 44773068 ~ 44774474 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008170
ATGAACCACGCCTCCCCATCCTCAACTCTCTGCCCCCTCTTTCAGAGTGACGTGATCATTGGGCTGGGCTGCCATGACCTGCGTGTGGCCGAGAGGTCCGCTTCCCTGTACCTGGACGGATGGGCGCCCTGGCTGCTCTTCACAGGGTACATGGGCAACCAAACTGTAGGAGTCTGGCAGCGTCCAGAGGCTGAGGTGTTCATGGAAGTGGCCCAGAAAATGGGTGTCCCCAGGGACAGGATCTTGCTGGAGACAGAAGCCACGAACACTGGAGAGAACATCAGGTTATCTTTTCATGTCCTGCTGGAGCACAATATCCCAGCCTGCAGGGTTATTCTCGTGCAGCAGCCATTCATGGAGCGCCGGGTTTTGGCTACATTTCTCCGCCAGTGGCCCGGAGAGAAGGAAAACACTCGTGCCATAGTCACCTCTCCCAGCGTCGACATGTGGGACTACCCCAACCCTGCGGTGGGCAATGCCAGCGACCTCATTTGCTACATGTTAGGGGTTGTTGAACGGATACGAGATTATCCACAGAAAGGGTTCCAAGTTGAACAAGAAATGTCGGCTGAAGTCCTCGATGCCTATCAGCGGCTCCTCCGCGCAGGCTACTCTCCCAAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008170 True 624 mRNA 0.56 4 44773068 44774474

Neighbor

gene id symbol gene type direction distance location
AMCG00008168 NA coding upstream 2956 44766145 ~ 44770112 (+)
AMCG00008169 ss18l1 coding upstream 12237 44753045 ~ 44760831 (+)
AMCG00008161 lsm14a,lsm14b,LOC105018105 coding upstream 24497 44743630 ~ 44748571 (+)
AMCG00008162 cdh4,LOC106571924 coding upstream 89368 44665636 ~ 44683700 (+)
AMCG00008167 NA coding upstream 119163 44577372 ~ 44653905 (+)
AMCG00008171 NA coding downstream 171278 44945752 ~ 44949206 (+)
AMCG00008179 NA coding downstream 223755 44998229 ~ 45012622 (+)
AMCG00008178 rae1,LOC105026338 coding downstream 238291 45012765 ~ 45019906 (+)
AMCG00008181 NA coding downstream 332939 45107413 ~ 45121480 (+)
AMCG00008188 ttll9 coding downstream 454168 45228642 ~ 45232701 (+)
G28956 NA non-coding upstream 23160 44691541 ~ 44749908 (+)
G28931 col9a3,LOC106571930 non-coding upstream 716460 44053965 ~ 44056608 (+)
G28862 NA non-coding upstream 877117 43894109 ~ 43895951 (+)
G28678 NA non-coding upstream 1571865 43177802 ~ 43201203 (+)
G28637 NA non-coding upstream 1652287 43109050 ~ 43120781 (+)
G28995 NA non-coding downstream 21450 44795924 ~ 44798463 (+)
G29148 NA non-coding downstream 579242 45353716 ~ 45354079 (+)
G29153 NA non-coding downstream 603537 45378011 ~ 45378353 (+)
G29223 NA non-coding downstream 765295 45539769 ~ 45542206 (+)
G29271 NA non-coding downstream 951509 45725983 ~ 45734261 (+)
AMCG00008132 NA other upstream 1467538 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 1616996 43144805 ~ 43156072 (+)
G28636 LOC105922603,LOC105919618,LOC107100266,LOC103465560,LOC103147358,LOC102223196,LOC106964922,LOC106524088,LOC108244412,LOC107655056 other upstream 1664826 43105713 ~ 43108242 (+)
AMCG00008102 prpf6,LOC107673318,LOC107705744,LOC102793577 other upstream 2335840 42413632 ~ 42437228 (+)
G28395 NA other upstream 2779691 41992859 ~ 41993377 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other downstream 248674 45023148 ~ 45036416 (+)
AMCG00008185 NA other downstream 372923 45147397 ~ 45171828 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other downstream 566100 45340574 ~ 45343914 (+)
G29183 NA other downstream 666039 45440513 ~ 45441064 (+)
G29353 NA other downstream 1493417 46267891 ~ 46268327 (+)

Expression


Co-expression Network