AMCG00008198


Basic Information

Item Value
gene id AMCG00008198
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45484630 ~ 45486967 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008198
AGGTTTATAAATGCAGGCTGTGCGCAATGGGGGGGTCATTAACAGGCATCATGGACAGCGAGCGTCTGCGGGCTGTATGCCCAGACCTTCCTGTACCCTGGAGCCAAGACAGCTCCTCATTGACAGACCTGGAAAAAGCCTTTGTTCATTGCCAGAGTCTGTCCGGCTCAACTCTGTCCCAGGAGTCGCAGACGAGCAGCCGAGAAGCCCTGACCTCACGCTCGGACATTGTGGTGGAGTACGCAGGAGTGCTTGTCCCCCAGTTCCACTCGCCTTCCCTGCAGTCTCCTTCCCGCTTGCTCGACAATCTCTCCCTACAGGCCCAGGAAACCCTACAGAACCTCAGCACATCGACCATCCCTCTGGACAGCAAGTCGTCCACACCATTTCAAGGGGAGCACCCCAAGAAGGTCACTCTGCAGAGTTCTCCCAACCTGTCCTGTTCAGatttctctgtgctgctgtctGCAGCCCAGCCACACTGGGAGATATCCCTGATCAGGAGTTTCCAGGACAGCTCCAATTCTCCCATGCAATTCAGTCCTCTAGATGTGGCCGAGTCAACTTGGAGTCCCCTCTGCAATTCGGGCCTCTCCTTTGCTGAAAGCTTTTCCCTGCCCTGTGCCGGAGTGCCACCCCAGTCCCACCTTGGGTCGGAACTCCAGAGGTCCTGGAAAGAGTCTGTCACAGCCAGCCAGGTCCCCTCTCTCACCCTCACCCTTCCTCCTACTGATGGCAAGTGGAAAAGGCACACTTAAAATGCCCCTTCCTGTGCAGAGAAGCTAGATGCTGGCCTTGGCAACTAACAGGATGTCGAGTTAAGTTTTTAACCAGACCACAGGTTGCTGTGCTTGAAAACCTTTTATTCTCTGTAGTACTCTTGCATTACAAATTCACATTTACTAAACTTTAATTGGGAATCCTGTAGGAAAGTAAATTTGTGATGCAACTCCAGTCTGGATTGTGCCATCTTGAATTTTTTGCAGAGATGGAGTGAATGTGGTAGAGGTTGCCAACTGCAGGATGGTCTCATCTCTACTGGTTCACAGATCTTTCTAAATGTATCTTCGTGGTCTTCCTTtctgtgaggtgtgtgtgtgtcctatTAACAAtgctaataaaatgtatatgaaataaaaaaataacaatg

Function

GO: NA

KEGG:

id description
ko04110 Cell cycle

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008198 True 1150 mRNA 0.50 2 45484630 45486967

Neighbor

gene id symbol gene type direction distance location
AMCG00008205 NA coding upstream 16171 45443938 ~ 45468459 (+)
AMCG00008204 NA coding upstream 61203 45416277 ~ 45423427 (+)
AMCG00008200 NA coding upstream 76167 45400869 ~ 45408463 (+)
AMCG00008199 NA coding upstream 84762 45375965 ~ 45399868 (+)
AMCG00008193 pigt,LOC106567380 coding upstream 148376 45328163 ~ 45336254 (+)
AMCG00008210 NA coding downstream 1665 45488632 ~ 45488966 (+)
AMCG00008211 NA coding downstream 112233 45599200 ~ 45638789 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding downstream 221601 45708568 ~ 45714043 (+)
AMCG00008218 NA coding downstream 380376 45867343 ~ 45911607 (+)
AMCG00008219 NA coding downstream 552981 46039948 ~ 46068818 (+)
G29153 NA non-coding upstream 106277 45378011 ~ 45378353 (+)
G29148 NA non-coding upstream 130551 45353716 ~ 45354079 (+)
G28991 NA non-coding upstream 667967 44768677 ~ 44816663 (+)
G28995 NA non-coding upstream 686167 44795924 ~ 44798463 (+)
G28956 NA non-coding upstream 734722 44691541 ~ 44749908 (+)
G29223 NA non-coding downstream 52802 45539769 ~ 45542206 (+)
G29271 NA non-coding downstream 239016 45725983 ~ 45734261 (+)
G29291 NA non-coding downstream 400982 45887949 ~ 45888412 (+)
G29320 NA non-coding downstream 605941 46092908 ~ 46093489 (+)
G29355 NA non-coding downstream 781708 46268675 ~ 46268989 (+)
G29183 NA other upstream 43566 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 140716 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 312802 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 448214 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2179100 43292596 ~ 43305530 (+)
G29353 NA other downstream 780924 46267891 ~ 46268327 (+)
G29418 NA other downstream 2093246 47580213 ~ 47586235 (+)
G29421 NA other downstream 2108137 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 2135985 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 2177550 47664517 ~ 47716582 (+)

Expression


Co-expression Network