AMCG00008200


Basic Information

Item Value
gene id AMCG00008200
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45400869 ~ 45408463 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008200
ATGCCCCAGTGGTGGCTCCTGTCCCTACTGGCTCTTTGCCACCTGTCTCACTCCTCAAACCCGGCCATCACATTGAGACTCACAAGGAGAGGAATGAACTATGGCCGCAATGTGGGCATGAACATCCTGCGGCGAGAGCTGCTAAACATGAAGATACCACCTCTGTCCGGGACTCTGCCAGCCCCTGTAATTGGCAATATACATTTCCGAATTTCAAGAGAGGACTGGGGTACCTATGAGCTGTCCATCAGCAAGATTACCATTTCAGCAACTATTGTGTTTGCCATGGACAATTCAGGACGTCCCACGGTGAGCAGTGCCAGCTGCAATTCCGACATCAGTGATGTCAGCTTCAGCTTTTACGGTGGCGCAAGCTGGCTGTACAACCTGTTCACTGGCTACATTAACAGTAACATTCAAACAAAGGCAAATGCTGACAAATATGCAGGGATTGATTACTCCATGGTCATGAATCCAAGGGCAACCAGTAACTACATTGATCTGAATTTGAACGGCCAGTTCTACAACAACAGGAAATACCAGGAGCCCCCTCTCAGTCCACCTTACGTCTACATCCCTTACTCCAGCAGCAGCATGTTGTACATCGCAATGTCAGAGTACACGGCCAACACCGCTGGCTTTGTCTACTTCAGCACAGGACAGCTGTACGTCGACATCACCGATTACATGATTCCAAGGAGTTCTCTTCTAAGGCTCAACACCAAATCAATTCTTCAATTAATAATGCCTGAGATTGCAGATCAGTTGCCTGCCTATCCAATAAAGCTGCAAATAAAAGCCAACAGACAGCCATCTGTAACCTTTCAGCCCAACAATATAACATTGCAAGTTTTTGGCTCCATTACTGCCGCATTGCCTGGCACCACCCTCGGCAACCTTTTCATTCTGAATGTGACTGCTAGTGTCGATGTCAAGATTCAGATTTCTGCAATTAAACTGTTTGGACGGACATCCCTTAACAGAATGAGGTTGTCCTTCGGCAGTGACTACATAGAGTTACTTAAAGTCCTACCGGCTCCCAAGATCTTGCGCGTGGATAAGGAAACACAGGCACTAAATATAGCCCGACTGATCGAGTTGCTGCAGCCCCTTCTTGAACAGGCTGTACAAGCTATAGTGATGCCCATGGTGAATGCACAACTCAGCAATGGATTCCCTCTGCCATCGTTTAGCTGGATGCAGTTTGTTAACCCACAGCTTCAGGTGAAGCAGagTTACATACTGATCGGGACCGATGCTCATTATACGGGTTGACTTCAGGGAGCCGGCAGTAGGGTCCTGATGAGACTCAAACACAACAAACCTCCGGGCTACAAATCTAACTTTAATCACATCTGTTTCAGTGCTTATAAACACAAAGTAACAATGTTACAAACAGTGTTAAACTTATACACAACATTAGCTTTTCTTTATATACAGTCGTGAATCTCATGTTATTTACTTTCCTCGACTCAAATAGCAGTTAGGCACTatcttgatgtttttgttttctcatctgtgtttgttttatacaatgttGATAAAACACGATTAGAATCTGGTGAACCTTGTTTCTTCATGTTACCTTCATTAAACAGATCTGTGCATATTCTCTCCaggtttcctttcctttcctttgcaCAATCTAGATCATAAAACCAAAGCACAGAGATCTTGATATGGGACATTCTGAAATAACAGTAATAGTATGTTGTGTAGAATGGTATGGTATGGTATTTGATAGCTCTCAACACAAGcgtaaaaacaaattaaattaatgttgtatctcaaaaatacaaaaggagtggagaggagagaggattAAAGCCTTCCTTatgaatcacaaaaacaaaccattgtTTTTTCAGGAAGCCTTAAGCTGAAGAGAACAGATGTTTCAGGATTAAGAAGGCGATATGCAACATGTGAAACTGCATTGCACTTTTATTGGCCTATCAGTATTAGAGCccgaccgatacaggttttttgggtccgatacctgtacgttttttt

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008200 True 2013 mRNA 0.43 14 45400869 45408463

Neighbor

gene id symbol gene type direction distance location
AMCG00008199 NA coding upstream 1001 45375965 ~ 45399868 (+)
AMCG00008193 pigt,LOC106567380 coding upstream 64615 45328163 ~ 45336254 (+)
AMCG00008187 NA coding upstream 131037 45245953 ~ 45269832 (+)
AMCG00008186 NA coding upstream 158517 45239938 ~ 45242352 (+)
AMCG00008188 ttll9 coding upstream 168168 45228642 ~ 45232701 (+)
AMCG00008204 NA coding downstream 7814 45416277 ~ 45423427 (+)
AMCG00008205 NA coding downstream 35475 45443938 ~ 45468459 (+)
AMCG00008198 NA coding downstream 76167 45484630 ~ 45486967 (+)
AMCG00008210 NA coding downstream 80169 45488632 ~ 45488966 (+)
AMCG00008211 NA coding downstream 190737 45599200 ~ 45638789 (+)
G29153 NA non-coding upstream 22516 45378011 ~ 45378353 (+)
G29148 NA non-coding upstream 46790 45353716 ~ 45354079 (+)
G28991 NA non-coding upstream 584206 44768677 ~ 44816663 (+)
G28995 NA non-coding upstream 602406 44795924 ~ 44798463 (+)
G28956 NA non-coding upstream 650961 44691541 ~ 44749908 (+)
G29223 NA non-coding downstream 131306 45539769 ~ 45542206 (+)
G29271 NA non-coding downstream 317520 45725983 ~ 45734261 (+)
G29291 NA non-coding downstream 479486 45887949 ~ 45888412 (+)
G29320 NA non-coding downstream 684445 46092908 ~ 46093489 (+)
G29355 NA non-coding downstream 860212 46268675 ~ 46268989 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 56955 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 229041 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 364453 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2095339 43292596 ~ 43305530 (+)
AMCG00008120 NA other upstream 2244797 43144805 ~ 43156072 (+)
G29183 NA other downstream 32050 45440513 ~ 45441064 (+)
G29353 NA other downstream 859428 46267891 ~ 46268327 (+)
G29418 NA other downstream 2171750 47580213 ~ 47586235 (+)
G29421 NA other downstream 2186641 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 2214489 47622952 ~ 47671421 (+)

Expression


Co-expression Network