AMCG00008203


Basic Information

Item Value
gene id AMCG00008203
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45467183 ~ 45484122 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008203
AAAACCTGCGCGAGACGCTGGGCGCGAGATAGAAACTACCGCGCGGGCAGTGCGTGTTGCCTCCAAAACCCGCACCGTTTCGCACCGAAAACCAGTCCAAATTAAAAAACCCTCATCCATGCGTCcgtagtggtggtggtgttggggGGGCGGATTGCCGTGAAATCACGCTGTTGCGGGCTGCCGAGAGCGGCGCGGAGACATGTCCTGGTGGGCGCGCGGGGAAGATGGTGAGGACACGGTGTATCAGGACACAGACTCGGATGTGGCAGAGCAGCGGGAAAGTGGAAAGGTCAAGGTGAAGTGGACAACAGAAGAGAGCCGCACTGAGCATCAGTGCCAGCACAGGTGGTTTAAGGTGCTGAACCCAGACCTGATCAAAGGTCCTTGGACAAAGGAGGAGGACGAGAAGGTCATTGAACTGGTGAAGAAGTATGGCACCAAGCAGTGGGCCATGGTGGCTAAGCACCTGAAGGGGCGCCTGGGCAAGCAGTGCCGGGAGCGTTGGCACAACCACCTCAACCCCGAGGTCAAGAAGTCCTCCTGGACAGCAGAGGAGGACCGTATCATCTACCAGGCCCACCGTGTCCTGGGCAACCGCTGGGCTGAGATCGCCAAGCTGCTGCCTGGCAGGACGGACAATGCCGTGAAGAACCACTGGAACTCCACCATCAAGCGCAAAGTGGAGATGGGTTTCTATGCTGGAGAGGAAGACAAGCCCCTGAAAGCAGTTCCCCCGCTGGAGCATGGAGAGGTCATGGAATACTACAAAGAGGACAAGCAGGCCGGGTTCCAGTGTGACGTGGTGCTGGAAACTGACCCAGAGCCCTCGGCTGCAGAACAGgcCTCCCCTCCCACCTCGGCCCCAGATCCAAAAGGCTCAGCCTCGGGGGAAGCGCTTTCCCCAAAGTCCCCGCCCCTCCCCCAGCTCCCCGGGGGGCTGACCCCTAAAAGTGAACCGGACACCTCGGGAGAGCCCTGTCCCAGTCGCTGGGTGGTGGACAGTGCTGGCTTCCTATCGCCCACGCCTGGCCCCGCCTTCAAGGAGGCGTTGGAGCTGATTGAGGGGTCTTCTCCTCGCCCCAAGCCGGCCAGAAAAAAGGGGAGCAGTGGTGATTCGAATCTCCCGGATTCGCTGAAGCCCTTTTTTAGAGACTTGCGGCATCACGAGGGAGGCATTACCACAATGACTTGCAAGCTCTGTCGTTTCCAAGTCCACTCCAAGCCAGGCACCACTTCCAACTTCCTCCGGCACATCAAGCGCACCGTCGGGCTCAGGCTGTACGATGAGGTGGAGAAGGCCGTCAAGCCTACTTTGATCCGGGAGCTGAAGAGCTGTATAGCCACGGGAGGGGGCGACGCCATCATTCATGCCACCCTGGACCTGTGGGCCAGCCGCTATGGGGAACCTATCATTGGCGTCCAGCTGCACTTTTTCGACGAGCAGTGGAACATCCATCGGCCCACCGTCGCCTTCCGTCACCTGAACCACAAGAACCTCGTGGCTGTGGTGGCCCGGGAGCTAGAGGCCGTGCTGCTCAGCTATGGCCTCTTCCCCCACAACATTGGATACATAATCACTGGGGAGGCTAAGAACATAATCTCCAGCTACGACCTGTTCTGTGACTACAGGGTGATGTGCTCCACCCAGAAGAATGACCCGGATGAGGAAGATGTCCTCGGTTTCCTGGCTGACTGCTACCCCATCGAGGAAACTGAGTTCTCGGAGATCCAGTTCGGGACGCGGGTGAACTGCATCGCACACCTCCTGCAGCTGGTTATCAAGGAGGCTTTGAAAACCTCACGGGTGGTGGAGAACCTGCTCTCCCAGGTCCACAATGTGGTGGCTTTCTTCCGTCGCAGTGCCTACTGGACTGAAGTGCTGGTGAAGGAGTGTGGCCTGTCTCTGGCCCCTCCACTCTCCGCCAGCAACTACCGCTGGAACTCCACCTTCACGTCCGTCCGCAAGATGGTGCAGGAGGCGGTATGGGGCTCTGTCATGACCCTGTTGGCCCAGGCTCGCATCGAGGCCAAGGACTCGTCCAGCTCCCCACCACAGGTGAGGGCCAAGCGGGAGCAGGTTCTGGACATCATTGGGCTGCTAGAGCCCTTTGAGGAGGCCACCCAGGTGCTGCAGGGTGAGGGCATCACCTTCTCTCTCATCATCCCCTCCATCATTGGCCTGGACAAGACTCTTGAGACCAGGTCAACAAACTACGCTCACTTCTGTAAGGCCCTGCGCAGCGGCCTGCATGCCAGGTTCCAGCCGCTCATCCTGCAGAGGGACCTGATTCTAGCCACTGTGCTGGACCCCAGGATCAAGCTGCAGCCCTTCTCAGACACCAAGCTTGAAGTGGAGAGTGGTTTGCTCAATGCCCCTTGCAAATTCCAAGCCAAGACGGTGGTGGAGTCAGCCATGGGTGACCTGGGTATCTGGAACGCCCAGGAAGAAGGGGGCCTGAAGCAGGAGGACAGTCAGGAAGATGTTAATGATGACACAGACGCCTCCAGCCCCATGAGCAGCAACCTCAAGCGCAAGAAGATCTTCAGCTTCTTCCAGCCACCCACTAAAACCATGAAGTTTTCAGAGCTGGATCTCTACCTGTCCGAGACTCTGCTGGACGGAGACGCCTCTCCCCAAATCTTCTGGAGGGAAGCCAGCCGTTTCCCTCAGCTGCAAAATCTGTCCAGGAAGCTCTTGGCTGTGCCTGCCACCTCCGGGGGCTTTGACCGCCTCTTCCCCCTGGCTGGATGCATTGATCTGGATGGCTGGTGTGACCTGACCACCTTTGACCTCCCCGAGGACAGCCAGGGCTCGGAGCTGCTGCAGTTCAGGCTGGAAGGGAGCACGCTGCAGGAGCTGAGCCGGGGGAGCCGGGGAGAGCTCATCCCCATCTCGCCAGGCGGGGCCACCCCCCCCTCCATTCTGACCCGTCGCAGCCGCCGGCGCCTCGCTCAGTCCCCGGGTAGCAGCCTCATCGAGCTCAATGACACCATGACCCCCAAGAGCACCCCTGTCAAGATCCTGCCCTTCTCCCCCTCTCAGTTCCTGAACATGTGGACCAAGCAGGACAGTCTGGACCTGGAGAACCCCTCTCTCACCTCCACCCCCGTCTGCAGCCAGAAGGCCATCGTTACCACACCCCTGCACCGGGACAAGACCCCCCTGACCCAGAAGGAGAACTCTGTGTTCATCACGCCCAACCACAAGTCTGACCTGAACACCACCCCCCGGACCCCAACACCCTTTAAAAATGCCATGGAGAAGTACGGCTCTCTGCAGCCAATGcCTCCAACCCCCAACCTAGAAGAGGACCTGAAGGAGGTGCTGCGCAGTGAGGCTGGGCTTGAGCTCATTGTGGAAGACGAGACTCCGCAGGAACAGAGACGCAAGCAGCACCATCGGCCGCCCATGAAGAAAGTGCGGAAGTCCCTGGCTCTGGATGCCATGGATATCAAAGAGAGCCTCCCAGTGAGACTGCAGGCCTCCAGACCCCCCTCGGCACAAAGCCCCAAGGAGGAGAGCGCTCTATCAGTTTCCCTGAACTCCTCATCCCTCTCCATGAAGAAGGAGGAGAACGTCTTGGACCAGGGCTTCATCCTGGCCCCCTGTGACAGGACCCCCGACCCCAGTGCTGCTCCCCCCACACCGATGTCCCAGGCCTGGGAGGCGGTGGTGTGCGGCCGGACAAAGGACCAGCTCATCATGACGGAGAAGGCCAGGCGGTACCTGCGCTCGCTGAACCCCAACCCCACCAACCGAGCCCTCATCCTGTCCTGAGCCCCAGCGCCCAGCAGCCCAGCCTGCCCCACATGCTGCCCCAGCCCTGCGCCCGACAGCACAACACACCCTGGCCCTCCGGCCTTGGGGTGCGCTGTACTTCTAGACCAAGAAAGAGTGTGATTTTAGCTGTTCAGAAAATCACAAACGTATGCACCCTTCATGCCCCAGTGCTCAGACAGCTGATGAGCCAATCTGCAGTGTCAAGATGTAAAATATTCATGACAAAACTTTTATCATAAATCACTTTTCTCACAACTTaatatcaatttttatttatttttatttctcatgtGACTCTTTAATAAAAGTATAACTAGATAATATGAAGCTTTTCCTGGAATAGAGGAGCAATCTATTTGTCTAGTCAAACAAAACTTTTCCAGAACTAAAACGCTCTTTCTACATGTGGCCACTTTAGTGCTTTTCCCATTGATTTATCACGTTTAGAGCATGATTCTGTCTTATCAGTGTAGATTACACCACCTCAACAGGATTTACTGTTTGTAATTCattccataatttatttattgaaaaggCTTAACTAAGCTTTAGAGAGGCTCAGCATTAACTATATAAacttgcatttattaattttgtttcttagGTTTAAAGTTAGCCTTTGgcttgttttgtatatattatttttctccacagTGTTGCTGCATTCCAGACTGTAGACCTGCCTGAGTGGTTATATAGGTTTAAGAAAGCAGGTAGTGGAGTTGGTTCAGTTTAAATAGCTACTTAGAGGTGAATTGAATTTGCTACAAGTTAGCAGGAAATGTTAGGTACAAGATACCCCACCTCCATCTCTACCTCTTTCCAAAAGACAGGCCAGGCTATCAGTGATGTTTACATTCTTAGAGGaggaaaacataattgaaaagaaaaatacaaacctaGGTCTTTATCTGAGTAGGTATCTGACTGCACTTCTCTACAGAGTTGTCCATGTCCATGTGTCCTATACAGGCAGCTGTATGGTGtggagggagaggcagggagtgAGCGATGTGTGACTCTGCTGTACGGCTCTGTATCTCCTGCTGCAGCCCAGGCCTCCCTGCTGGGAGACCTGCTGCTGTGAAGGGGCTGCTTAGGATATGTACAGCAATCCTGATGCAGGGATCCACAATACCAG

Function

GO: NA

KEGG:

id description
K21769 MYBL2, B-MYB; myb-related protein B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008203 True 4925 mRNA 0.56 16 45467183 45484122

Neighbor

gene id symbol gene type direction distance location
AMCG00008201 LOC106582837 coding downstream 31822 45421765 ~ 45435361 (-)
AMCG00008202 LOC102194700 coding downstream 52370 45409263 ~ 45414813 (-)
AMCG00008195 NA coding downstream 117096 45344179 ~ 45350087 (-)
AMCG00008197 LOC106572146 coding downstream 127302 45337454 ~ 45339881 (-)
AMCG00008196 NA coding downstream 164217 45295300 ~ 45302966 (-)
AMCG00008209 ift52,LOC107730620 coding upstream 13984 45498106 ~ 45503562 (-)
AMCG00008206 sgk2a,sgk2,LOC107564803 coding upstream 19920 45504042 ~ 45518710 (-)
AMCG00008208 NA coding upstream 41105 45525227 ~ 45537055 (-)
AMCG00008207 LOC108254894,LOC105009000,LOC108427776 coding upstream 55635 45539757 ~ 45546688 (-)
AMCG00008217 NA coding upstream 156164 45640286 ~ 45641803 (-)
G29192 NA non-coding downstream 4653 45461779 ~ 45462530 (-)
G29182 NA non-coding downstream 46721 45419590 ~ 45420462 (-)
G29170 NA non-coding downstream 113097 45353807 ~ 45354086 (-)
G29081 NA non-coding downstream 430770 45034445 ~ 45036413 (-)
G28976 NA non-coding downstream 779008 44682437 ~ 44688175 (-)
G29206 NA non-coding upstream 5885 45490007 ~ 45490890 (-)
G29249 NA non-coding upstream 115437 45599559 ~ 45714037 (-)
G29284 NA non-coding upstream 309556 45793678 ~ 45793951 (-)
G29294 NA non-coding upstream 495138 45979260 ~ 45979468 (-)
G29348 NA non-coding upstream 766541 46250663 ~ 46251181 (-)
AMCG00008192 NA other downstream 238679 45149501 ~ 45228504 (-)
G28970 NA other downstream 1048987 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 1883770 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 2347019 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 2702529 42761004 ~ 42764654 (-)
G29301 NA other upstream 566573 46050695 ~ 46054346 (-)
G29361 NA other upstream 996824 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 2096017 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 2182520 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 2639803 48123925 ~ 48124682 (-)

Expression


Co-expression Network