AMCG00008205


Basic Information

Item Value
gene id AMCG00008205
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45443938 ~ 45468459 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008205
atgtcCCAGTCCAGATCCAGGCACCTGTATTACTTTGGGGCTTTGTGCCGAAGGGGGTCTGGAGGCCTGCAGTCTCACTGGGAGGCTCTCTTTGATATCCATGGCATCCAGAGCCAGGGACTTCCACAACTTCTTCATGGGCAGCCAATGGTGCTGGGAAGGGAGGAGAGTGTTATATTAGTAAATAAGGGACGCAATATCCTCAGCATGCACCGTGAAGACCACAGTGCGCTCCGTTGGAAAGAAAGTGAGAGGAGAAGACAACAAATCCAGCTGGCTTCTGAGACCTTTCCAGAGTCTCTCTTTCCTGCACCTTATAAAgttTGCAGGAAGGGAGATGCACTAGCTTGCCGCATCCAGAGGCTGTTTGGTGATTACGACAGAGTGATGAACCCAATTGGAGGCAAGGGTCTTGAGAAGCCCATTGCGGTCCCCAAACCCACTGTGACCCTGGAGAAGAAATCCACCCGGTCATTTCTTGGGGAGCAGCAGCGCCATCGGTCCAGGTTCCCCTGCGACCGCAAAGCCCACAGGGGCGCTCCCTCCCACAGCCACTCACTCGCACCCAACAGGCAGCACTCCAGCCAGGCTTTCCTCCCAAAGCTTGGCTCCAGGATGCAGAAGCCCACAGCCTGTGTGCGCCCTGTGGATGGCCAGAAAGCTAAACCCAAGACATCATCTGAAAACCGCAGTCAGGTGCGCAGCAGCAGCGTGAGAGACAAGAAGTCCGGCAGCAAGGCGTCTCTTTCCAAACTTAACATCCCGTCCCAGCCACTGGAGTGCAGAGTGAAGGACCCAATTGGAGACAAGGGTCTTGAGAAGCCCATTATGGTCCCCAAATCCACTGTGACCCCGGAGAAGAAATCCACACGGTCATTTCTTGGGGAGCAGCAGCGCCATCGGTCCAGGTTCCCCTGCGACCGCAAAACCCACAGGGGCGCTCCCTCCCACAGCCACTCACTCGCACCCAACAGGCAGCACTCCAGCCAGGCTTTCCTCCCAAAGCTCGACTCCAGGATGCAGAAGCCCACAGCCTGTGTGCACCCTGTGGATGGCCAGAAAGCTAAACCCAAGACGTCGTCTGAAAACCGCAGTCGGGCGCACAGCAGCAGTGTGAGAGACAAGAAGTCCGGCAGCAAGGCGTCTCTTTCCAAGCTTAACATCCCGTCCCAGCCGCTGGAGGCGTCCGTGTCCAGAGAGGCCAGTTGTATGGATGCAATCTTAAAGGACGGTGAAAAGCTTCCCTTTGGGCAGCTCAACAGCAAGTCCTACCTCTCACTCTACTGGCTCCTGATTGCTGTACATATCCTAAGCAGCCCCTTCACAGCAGCAGGTCTCCCAGCAGGGAGGCCTGGGCTGCAGCAGGAGATACAGAGCCGTACAGCAGAGTCACACATCGCTcactccctgcctctccctccaCACCATACAGCTGCCTGTATAGGACACATGGACATGGACAACTCTGTAGAGAAAAGTACAGCGCACCCCAAGGCCGGAGGGCCAGGGTGTGTTGTGCTGTCGGGCGCAGGGCTGGGGCAGCATGTGGGGCAGGCTGGGCTGCTGGGCGCTGGGGCTCAGGACAGGATGAGGGCTCGGTTGGTGGGGTTGGGGTTCAGCGAGCGCAGGTACCGCCTGGCCTTCTCCGTCATGATGAGCTGGTCCTTTGTCCGGCCGCACACCACCGCCTCCCAGGCCTGGGACATCTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008205 True 1710 mRNA 0.58 8 45443938 45468459

Neighbor

gene id symbol gene type direction distance location
AMCG00008204 NA coding upstream 20511 45416277 ~ 45423427 (+)
AMCG00008200 NA coding upstream 35475 45400869 ~ 45408463 (+)
AMCG00008199 NA coding upstream 44070 45375965 ~ 45399868 (+)
AMCG00008193 pigt,LOC106567380 coding upstream 107684 45328163 ~ 45336254 (+)
AMCG00008187 NA coding upstream 174106 45245953 ~ 45269832 (+)
AMCG00008198 NA coding downstream 16171 45484630 ~ 45486967 (+)
AMCG00008210 NA coding downstream 20173 45488632 ~ 45488966 (+)
AMCG00008211 NA coding downstream 130741 45599200 ~ 45638789 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding downstream 240109 45708568 ~ 45714043 (+)
AMCG00008218 NA coding downstream 398884 45867343 ~ 45911607 (+)
G29153 NA non-coding upstream 65585 45378011 ~ 45378353 (+)
G29148 NA non-coding upstream 89859 45353716 ~ 45354079 (+)
G28991 NA non-coding upstream 627275 44768677 ~ 44816663 (+)
G28995 NA non-coding upstream 645475 44795924 ~ 44798463 (+)
G28956 NA non-coding upstream 694030 44691541 ~ 44749908 (+)
G29223 NA non-coding downstream 71310 45539769 ~ 45542206 (+)
G29271 NA non-coding downstream 257524 45725983 ~ 45734261 (+)
G29291 NA non-coding downstream 419490 45887949 ~ 45888412 (+)
G29320 NA non-coding downstream 624449 46092908 ~ 46093489 (+)
G29355 NA non-coding downstream 800216 46268675 ~ 46268989 (+)
G29183 NA other upstream 2874 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 100024 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 272110 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 407522 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2138408 43292596 ~ 43305530 (+)
G29353 NA other downstream 799432 46267891 ~ 46268327 (+)
G29418 NA other downstream 2111754 47580213 ~ 47586235 (+)
G29421 NA other downstream 2126645 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 2154493 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 2196058 47664517 ~ 47716582 (+)

Expression


Co-expression Network