AMCG00008206 (sgk2a,sgk2,LOC107564803)


Basic Information

Item Value
gene id AMCG00008206
gene name sgk2a,sgk2,LOC107564803
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45504042 ~ 45518710 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008206
ACGAAAACCAGCAGAGATGTGGggctccaggactggtttgggaaTCTAAACGACCCATCACTGCTCTGATACGCCTGGTAACGATACCGTTTCTtggaaaactttatttttcttttatttgtgtaaaaagTACAAATCGGACGAAATGCATCGGAGTGCGTGCTTCACTTGCATCCTGAAGGTGGCGGACATATTTCAAGACTTCATACAGAAAAGAAGAGCAGCACTTCAAGAGTTTGTCCAGAAGTCAAAAGAGACGTTATGCAAATACTCTGAAGCGATTTCTCTTTTGGAGATGGATCGAACAAAACCTATGGCTAGCAGTAATCAACTTCGGCTGCCCTCCACCTGTGATGTGAACCTGGGACCTTCGGCTAATCCTCATGCCAGACCTACAGACTTTGATTTTCTGGCAGTGATTGGAAAAGGAACCTTTGGGAAGGTGCTCCTGGCCAAACGAAAGTCAGACAACAAGTTTTATGCTGTGAAGGTTCTGCAGAAGAAAGTTATCCTGAAGAAGAAAGAGGTTGGAGATCTCAAGCCAGAAAATATCCTGTTAGACTCTCAGCTGGAGATTAAAAACCATGTGTTTTTCTCACCTTTAAACTGGGATGACCTTTACCATAAGAGAATCAACCCTCCATACAACCCCAATGTGAATGGCCCAGCTGACCTGCGACACATTGACCCAGAGTTCACCAAAGAGATGGTCCCCAATTCTGTGGGCCGCACGCCTGAACTCAACTCCTGCCTGGGAACCAGCAGCTCCAATGCCTTTAAGGGCTTCTCCTATGTGTCCAATGATGATGCTTTTCTTAACTAAGAGTAACCGTGTGAGCCCTGCTCTACCTCCCCTCTGACCACTGCCAGAGACCAGACTGAACTTCCAGAAACCCAAGGCAGATCAACCACACTTTTTGTTCTTCACAAAAACTCGAAATCCAAGGTCACCTATGATGACTTGAGTTGACCAAGATCCCAGCATTCAGGGTTGAATCGAATGACCTGTTCGCTTTCCCCTTTTCAGTGTTGCTTCATGCTTCACTTAATAATAGGAGATGGAAAGGATCCAGCATGGGTGTCTGCCCACCCTACTTGTGGGTCTATAGCAAATTCTATGTGTACATAATTAAAACTGCAATATTTCAGGCTTATtgataacttatttaattttttccccctcttggCCTTGTTTGGATTTATAACAGGATGAAATTTAACTCCAACCGGCCACAGTGTAGATCCTAAATGGCcaccttttaattatttctgtccTGTCACAAACTCGGATCATGTAGATAAAACAATTACCATAACAATTCTAGACAATCTGCAAAAGTTGCATCAGACTATAATTGCATACAAATCGAATTATCTAGTCTGGGAGGGCTGCTCATTTGAGTTGGGTGTGGAAGTGTTGAGTGCATTGTGCTCACACGAAAACCTCAGGGATTCCTTTGTTAGTGGATTTGAATGACTTTCCTTTTCAGTTCTTCACAAAGTCTCCATTGAACACAAGGCCTTTCTGATTTAGTTGAATGGAGACCCCAGTGCACTGCACTGAGCACTGCATGAGACCCCTTTTGAATAATGTACCAgtgagttttgtttgttgttttgttgggtTTTGAACTGTTTGTAATACACTGGATATCTAATAGGCCTATATGAAGAGTGTGGGTGTTGTAAAAAATGATCTTGCTCCCTGGTAGTCTTATGAGAGTCCCATTATTAATTAAGAGCAAAGTCCTTGTCTCCAGAGAACTTATCTTTGTTGTTGTGAATGCCAAATTCATAACAACAATGTAACATGGGTTTGTCTCTCCCTGTAAAGCCTTTGCCCTTTCTACCCAAAGCATAGATCTTATCAAAATAAagactgtactgtatattactcCTGCACATACACCTTTGATTCCATGTGGCCTGGGTATCTATATATCAGCCCTTCTAAAAATGATACAGCTGGTGACTTTGTTTTGCATATAATGATGTTTAACTGATCCAGATGTTAAAATCTAATGTGCAATTGTGATTACAAACACTTTTCTTGATCTTAAATTTCATTAATCGATCGGGTCTTTACTGGTGCATTCCCTGGGCATGTTTTAGCTGTTGAAGATTTACTGATTTAAATGGTGTTTTTttgaatctttatttttttagctttgCATCAAATACATGTCTGACTGAGGGAATTAATGCACTTCATGGTGCTAAAGTTTGCCACAAGTTCAAGCTTTGTTAGAAAGCCCTGGATAGACTATTTCCTTATTACATCTGTTTTCATGGGGCACCCTTGGGCCAGACACTAGTCGTGCGCAGGTTAGCCTTTTGTGTCGAAAccctattttaaatatttgtattattcaccCAGGTATAAATACTCTTAGTTTTCCTTctgtatgtttagttttttcttgctGTAAATCGCTTTCCTATAGCTACAATAGGCCGATTTATATCATtggaatattttgtattttggtgATGGGGTGGGGTAGGtctgtatgcaaatgtattgtaaacacatgtatttactgtgcaatc

Function

symbol description
sgk2a Predicted to enable potassium channel regulator activity and protein serine/threonine kinase activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Predicted to act upstream of or within protein phosphorylation. Is expressed in blood cell and vascular endothelium. Orthologous to human SGK2 (serum/glucocorticoid regulated kinase 2).
sgk2 Enables potassium channel regulator activity. Predicted to be involved in intracellular signal transduction and peptidyl-serine phosphorylation. Located in nucleoplasm.

NR:

description
PREDICTED: serine/threonine-protein kinase Sgk1-A-like

GO:

id name namespace
GO:0006468 protein phosphorylation biological_process
GO:0005524 ATP binding molecular_function
GO:0004674 protein serine/threonine kinase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008206 True 2550 mRNA 0.41 9 45504042 45518710

Neighbor

gene id symbol gene type direction distance location
AMCG00008209 ift52,LOC107730620 coding downstream 480 45498106 ~ 45503562 (-)
AMCG00008203 NA coding downstream 19920 45467183 ~ 45484122 (-)
AMCG00008201 LOC106582837 coding downstream 68681 45421765 ~ 45435361 (-)
AMCG00008202 LOC102194700 coding downstream 89229 45409263 ~ 45414813 (-)
AMCG00008195 NA coding downstream 153955 45344179 ~ 45350087 (-)
AMCG00008208 NA coding upstream 6517 45525227 ~ 45537055 (-)
AMCG00008207 LOC108254894,LOC105009000,LOC108427776 coding upstream 21047 45539757 ~ 45546688 (-)
AMCG00008217 NA coding upstream 121576 45640286 ~ 45641803 (-)
AMCG00008215 lpin2 coding upstream 126538 45645248 ~ 45662347 (-)
AMCG00008213 NA coding upstream 198682 45717392 ~ 45724427 (-)
G29206 NA non-coding downstream 13152 45490007 ~ 45490890 (-)
G29192 NA non-coding downstream 41512 45461779 ~ 45462530 (-)
G29182 NA non-coding downstream 83580 45419590 ~ 45420462 (-)
G29170 NA non-coding downstream 149956 45353807 ~ 45354086 (-)
G29081 NA non-coding downstream 467629 45034445 ~ 45036413 (-)
G29249 NA non-coding upstream 80849 45599559 ~ 45714037 (-)
G29284 NA non-coding upstream 274968 45793678 ~ 45793951 (-)
G29294 NA non-coding upstream 460550 45979260 ~ 45979468 (-)
G29348 NA non-coding upstream 731953 46250663 ~ 46251181 (-)
G29354 NA non-coding upstream 749183 46267893 ~ 46268278 (-)
AMCG00008192 NA other downstream 275538 45149501 ~ 45228504 (-)
G28970 NA other downstream 1085846 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 1920629 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 2383878 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 2739388 42761004 ~ 42764654 (-)
G29301 NA other upstream 531985 46050695 ~ 46054346 (-)
G29361 NA other upstream 962236 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 2061429 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 2147932 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 2605215 48123925 ~ 48124682 (-)

Expression


Co-expression Network