AMCG00008217


Basic Information

Item Value
gene id AMCG00008217
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 45640286 ~ 45641803 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008217
ATGTCTCTCTCTAAACCAGAACGGCATTTCCTAGATGAACTGAGCTGCCCGATCTGTCTGCAGCTCTTCTCTGAGCCGGTCCTGCTGCCCTGTGGTCATAACTTCTGTGTCTCCTGTATCGAGGGAGTGATTGAGCAAGAGAGTGGGAGAGGACGGCACGCCTGCCCCGAGTGCCAGAGTGAGTACAGGGGGAGAGCAGCGCTGCAGAGGAGCTTCAAGCTCTGTAACATTGTGGAGGGATACAAAGCCAGCCAGGGCTCCGGCGACTCTGAGGTACTCTGCATTATGTGTCTAGAGAATCCTCTCCCGGCAGTAAAGACATGCCTGAAGTGTGAGACCTCAATGTGTTCCCTGCATCTTCATCTGCACACAAAGAAATTGTCTTTCCAGAACCACACTCTGGTAGGGGCCATTCTACTCTCCTGCCCCAGCCGGGCCCAGATGATGAACCAGCCACAGAGTCAAGTACCAGACCCTGCTGAACTGCAATCCAGACTGGACTCCCAGATGAAGGAAATCGCAGCCAACCTGAAGACTATCGAGTTGCTCTTGCAGAATGGAGAGAAGACAAAAGCCGCAGTGAAAGCCACCAACTCTGAACTCAAACAGAAGGCCGTGGGGCTGTTGGACCACATGGTGGAGCTGGTGAAGAGCTACAGATCCCAGGTGATTGAACTGATTGACACAGAGCAGAGCCTGAGTGAGGAGAGCCTGCAGGGGAGCATGCACCAAGTGGCTGAGCAGCAGGAGCTTCTGAAGGCCACACAGCTCCAGGCCCAATCAGTCCTGGCTGAGCAGGACGAGAGTGTGTTGGCTCAGAAGCTCGCAGCCATCGAAACTCCAATAACCGAAGTCCTGAAGCAACCTCTGAAAGAACCATGTGTAGCACATTCAAACCCAAAGAGTGGTAAAGGCACTTCCCTGAAGAAAGCCACTCATCTTACAAAGGTTGAGGTGGCACTGAACTATGAGACTGGGACAGTGTCCTTTCACAGCATTAGAGATCAAAGGGTTCACCTGCACACTTTTAACACAACCTTTACAGAACCGGTGCATCTTGGCTTTCGCATTGTGTCCTGTAGGCCAAAAGCTCAGATAACTGTGCATTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008217 True 1113 mRNA 0.52 2 45640286 45641803

Neighbor

gene id symbol gene type direction distance location
AMCG00008207 LOC108254894,LOC105009000,LOC108427776 coding downstream 93598 45539757 ~ 45546688 (-)
AMCG00008208 NA coding downstream 103231 45525227 ~ 45537055 (-)
AMCG00008206 sgk2a,sgk2,LOC107564803 coding downstream 121576 45504042 ~ 45518710 (-)
AMCG00008209 ift52,LOC107730620 coding downstream 136724 45498106 ~ 45503562 (-)
AMCG00008203 NA coding downstream 156164 45467183 ~ 45484122 (-)
AMCG00008215 lpin2 coding upstream 3445 45645248 ~ 45662347 (-)
AMCG00008213 NA coding upstream 75589 45717392 ~ 45724427 (-)
AMCG00008214 NA coding upstream 95685 45737488 ~ 45760782 (-)
AMCG00008216 NA coding upstream 135659 45777462 ~ 45786981 (-)
AMCG00008222 NA coding upstream 470133 46111936 ~ 46123767 (-)
G29206 NA non-coding downstream 149396 45490007 ~ 45490890 (-)
G29192 NA non-coding downstream 177756 45461779 ~ 45462530 (-)
G29182 NA non-coding downstream 219824 45419590 ~ 45420462 (-)
G29170 NA non-coding downstream 286200 45353807 ~ 45354086 (-)
G29081 NA non-coding downstream 603873 45034445 ~ 45036413 (-)
G29284 NA non-coding upstream 151875 45793678 ~ 45793951 (-)
G29294 NA non-coding upstream 337457 45979260 ~ 45979468 (-)
G29348 NA non-coding upstream 608860 46250663 ~ 46251181 (-)
G29354 NA non-coding upstream 626090 46267893 ~ 46268278 (-)
G29375 NA non-coding upstream 1014431 46656234 ~ 46656566 (-)
AMCG00008192 NA other downstream 411782 45149501 ~ 45228504 (-)
G28970 NA other downstream 1222090 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 2056873 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 2520122 43097111 ~ 43120164 (-)
G28581 mafba,mafb,LOC107562627,LOC107713570,LOC106535696 other downstream 2875632 42761004 ~ 42764654 (-)
G29301 NA other upstream 408892 46050695 ~ 46054346 (-)
G29361 NA other upstream 839143 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 1938336 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 2024839 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 2482122 48123925 ~ 48124682 (-)

Expression


Co-expression Network