AMCG00008219


Basic Information

Item Value
gene id AMCG00008219
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46039948 ~ 46068818 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008219
ATGAGTCCATGTCGCCCTCCTCAGAACCCAGACTCGCTGGACTCCTCCATTCAGAGCGCCCTCACGGCCCTCTACCCACCATTTGAGGCCACGGCCCCCACCGTCCTCAGCCAGCTCTTCCGGGTCATCGAGGAGCGTTACCAGGGCGACGCATTGCAGTGCTTCCTGGACTTCCTGATCCCCACCAAGCGCATCCTGGAAAGTGTGCAGCAGGCTGCCTGTGTGAGTGTCACTCCAGCACGGTTAGAGTTAGGGTACCCAGGAGTCCCTAACCTCAACCCTACAGCGATGCCCATCGTAGTAAATATTGACCTTCTCTTGCAGGCTGTGTACTCTGACGTGCTCTTCCGCTTTGAGGGTTGGCCACtctgcctgagagagagggtggtgATCCAGCTGGCGTCCCTCAACCCCTTGCTTTTGCGCCCAGGAGATTTCTACCTGCAGGTGCAGCCCTTTGGGGAACAGGCAGCCCGTATCGTGCTCAAGAGCCTGCTGGAGGATCACCGGGAGGTGGAGGAGACCCCTGTCCCCGAGACCTCTTACCCCAGCATATTCACCAAAGACTGGCTGGAGGAGATCAACCAGGGACGCCATGGCACCCCGCTGCACACATGCCTGCTGTCCACGGATCAGGGCATCGTGAAGGTACCGTGGGCACAAGTGGCCAGTCCAGAGTTTGTGGACAAACCTAAAGCCATGGCCAGCTCTCTGGTAACCCCTGAGGTTCCCCCAACTGCGCCGCCCCCTTCCTCTAACCCATCTCCCTTCTCCGTGGAGACCAGGATTCTCCCCGCCAAGGACGGCATTGCAGTCTCCCTCAGGCTCGTCGATGGCACCTGCACCAGGCTTATCAAGGTGGACCAGCCCAAGGTGGCTGGCAAACCCATTGGCTGGGTGTCACCCAACACCTGGGACAGCCGCAACCGAGAGCTGGAAGGGGATTATGTGGACCTGGTGGAGTTCACCAAGGAGAGGGCTGCTCTGGCCCTCAGCAGGTTACCTCCACGGACTACAAAGGACCCCCCTTCCTTTGAGGCATCCAGGCCTCTGCCCCCAGCCAGCGGGGACCCCACGCCCTGTGGTCGGACTGCCCAGTTCTCCGAGGAGCCCTGCACCCCGTGTCTGAGGAGGAAGCTGGGGCATGAGTCCAAACTCCAGGAGCTACGGTGCAGGTATCGGGAGTCCTACATGGCAGCCCTCCAGAATCCCGTAAACTTTGAAAGAGGGGACATGGCACCCATTTCGGAGGAGTCGGCCCCTGCCAGGAGAGGGTCAGGCTCCGTCTATGACAGTACAGAATCTGGCCAGGCCTACCAAACAGAACCTCAGTGTCAGGTTGTCAGCAACGATTCTCCCGTTTCATGCAGGGAGTCAGGCAAGGTGAAAGGTAAGCCCTGTTGTACTGGGGAAGActctgtgaaacaaacaaacaagaatgaGGGGATACCttcttccccttccccttccccatCCCTTGTTTCAGAATCCCCTAGAAAATGTTCTTTGGGGCAAAGCACAGCAGACATTGTGAGCAGTGACGTTTGTACAGAAATGATTCCTACCATCCATGTTGTACACTGTAAGAAGACAACAGTATTCGGACTGGTATCCCCAAAGGTGGACAGATGgaaatccattaaaaaagATGTTAGCCAGGTATGCAGAGCTGAAACGGAGGCTCCCACCCAACAGACAAACGGCCCTGAGAAAGCATTGCCCTCTAATGCAGAGAGGACCGCAACCCAGCCAGCATCCCGCTCTTGTGGACCGGGGCCTGGCTCAGCACAGGAACCCGGCGGTCATCTTCTGCATTTGGGCATTGCATGTTTACCAGGCAGCAGAGACAGGGCCGGGAGGGCTGTGGTGGAGGTGTATGGAGACCATCACGGCTGGAAGTCCCCTCTGCTCTCCAGCCAGGAGCTCTGCAAGCTGCTGTTGCACTTCTACTGCATTCCCAGGAAAGATGTCCGGGATCTTGGAATGACCTTAGTCACAGATGCCAGAAGGAAAGCCCCTCCCCCAGCTCTGTTTAAAGCCTTGTTGATGGTGCAGGAGCAGGCCCTCCATGCCGTTCATGGTGTCCTGATACTGGTGGACAAGGAGACCAGCCCTCGCACAGAGAGACACCCAGGACTGCAGGTGGAAGTGATGACGTCGTTGAAGGCGCTGCATAAGGTTGTGGAAGGAAACCAGCTAACGGCCAGTTTGGAGGGCACATTTCCTTACAGCCACAGTGACTGGATGCAGCTGTACCAGAAGCTGGACCCTTTTGTGCTGGATCTACGAGAAGCATCCAGTTTACTCCAGAAGGCCATCCGGCAGTTTGAAGGTAGCAAGAAGATCAACACCATTCAGGAAGTCCAGCAGTGCATTCAGGACCAGAAGACCATGATGAAGGAGGTGCTGGAGGACACTCGATTGGTGGCTTTGCAGCGGCAGGGCGGGGCCATCCTAGCCAGACTGAGGAAGGAAGAACCCCGGTTCACTCACTCTGAGGACTACCGataCGCCATGGAGTGTGTCACCAGCCTGTACAACCAGGTGGAAGACCGGGTTCACATGCTGGTCATGAGGTCTAACCAGTGCCTGCAGCATCTCGACTTCCTGCTCAAGCTCAGGGAACTGGAGGGCAGGTTTAAGAAGATCAGGGAGTGGTTCGATGCGGAAGGGGAGAGGCGACTGCTGGAAGCCGATTCAGTGGAGGACTCTCTGGAGAGGGTGGAGCAGACGCTGCAGAGCTTTAAGTCCTTCCTCAACCAGGCATCTGAGCAGAAACTCCAGGCCATGACTCTAGTGAAGGAGGCCGAGAAGATCCAGGGGTCGTCCTACCCTGAGATGGAGGTTTTCCGCACCATGGCCACGGAGCTTGCTAAAGACTGCAGACAGTATCTGGAGCAGGCCAGACCCAGTAGCAATTCAGTTAAGGATGACTTGAGTGAACTTGAGAAATACCACGATAAATTCACAGCCTTTTCTACAGAGCAGTTCCAGGAGGTCAAAGCTCAGGCCTGCACCCTCAAAGGCTCCAGGGGGATGCGGCTGTGGAACGTTGCCTGGCTCAAGGTCCAGGAAGTCAGGCAGCAGCTAGAGGAGAGGGTGCAGGACTTTGAGAAGGCCCAGGGTTCTGTGGGGGTGACACAAGATCTCAGGAGGCCAGGACCAGAGGAGACTCTGTTGGTAACATCTTCTGTTAGTATTGGCCCTGTGAGGGCACAACCCTCACGACAGGAACCAACAAGGACTAATCAAGTAGTGCTGGAAAGCAGGAACAGCCAACCCCAGGAAAATGATTATGCCActgttacatgttttaatttaaacttcaaACCTGACAACAAAAGCTGTAAGGGACTGAAAACTGTGTCGGCTCCCAAGAATGAACCCTGTGTCCTCCAATGCTCTGATAAAGAGGGAGTAATGGCAGTTCTGAAGGAGGGCAAAGAGCTTTCCAGGGAGGACAGCAAAGGAGCGGATTTCCCTCTGCACGCCCCTGGGAATGAGTGGTTTCCATGGCATCAGGCTCTGGGCAGGTCCCTAAGCGAAGGCTCGGCTGTGTGCGCTCCTCAGACTGAGCCACAGGCCTCACTGGCCTCTCGCGCTCACAGCCAGCCCTCGCGCAAGATCCTGCAGGCTGCCCGGGACTTCCAGATCTCTCGGCATGGCAGCTTCTGCTCTGATGACTCCTGCTGTCCATCTGCAGGCGACACCGGTGACCTGAGCAAAGCAACCTGCCCCACAGCCACCCACCACAGGCTTCCCATATGCCAAGGACCAGCCTCAATGACCAGCACACAACCCGGGGACAATGCTGGCAACTTTTTGAAGCTGCAGAGGATCATGGAGGAGCTGTTGCTGACGGAGCGGGAGTATGTCCGATCCCTGGGCTACATCATCGCTCACTACTTCCCACAGATGGAGCGGCCCGATGTTCCCCAGGACCTGAGGGGCCAGCGTGGCCGAATCTTTGGCAACCTGGAGAAGCTGCATGACTTCCACAGGCACTTCTTCCTCAAGGCGCTGGAGGGCAGCGTTAAAGAGCCCCTGCGTGTGGGCCGCTGCTTCCTCAGACACAAGGAGAGCTTTGGTCTCTATGCCCTCTACAGCAAGAACAAACCCCAGTCAGACTCTCTGCTCATTCACCATGGCCATGACTTCTTCAAGCAGAAACAGCTGGAGCTAGGAGACAAGATGGACCTGTCCTCTTACCTGCTGAAGCCAGTCCAGAGGATCAGCAAGTACAACCTCCTCCTGCAGGACATGGTGAAGGAGTGTGGGCCGCACCGGGGCCGAGAGAGGGCCGAGATCCAGGGCGCCCTTGAGGTCATTCGCTTCCAGCTGCGCCACGGCAATGACCTGCTCGCCATGGACGACATCCTCGACTGTGACGTGAACCTGAAGGAGCAGGGCCAACTGATTCGACAGGATGAATTCCTGGTCTCCTTCCGGAAGAAGAAGTGTTTCCGGCACATCTTCCTCTTCCAGGACCTCATCCTCTTCAGCAAAACCAAGAAGACAGAAGTGGGGAatgatgtgtatatttataaacagtCTTTtaagACCTCTGACATTGGAATGACTCACAACGCGGGCGACAGCGGACTGTGCTTCGAAATTTGGTTCCGCCGTCGAAATTCGCATGACACGTACATTCTTCAGGCAGAGAGCGGAGAGGTGAAGGAGGCCTGGACCAGAGACCTGGAGAGGATTCTATGGGAACAGGCAGTACGCAATAGAGAAATCCGGATGCAGGAGAGAGTGTTCATGGGAATCGGTAGCAAGCCCTTCATGGATATCAAACCCAGTGAGGCGGCCATTAGCGACAGGGCTGTCAACTGCGTCCCAACTGGAAGAGAATCCAGAGCATTATCGGGCGTTCCACTGCCCACCAACCACGAGCTACTCCTGTCACCAAGACCGAACTCCATTGGCTCAGGCAGCAGTCTGTCATCTTCTGGTAGCCatacctcctcctcatctgGAAGGGgatccctccctccccacagcTATCTCTCCAGCCCATCACAGAGAGGGGATGCCAAAGGGGGCATCTACTCCATGACAGGAGCTCTAGAGGAGGATGATCTGGACAATGACACAGAGAACCTTCATCTGCTATTGGACAGCTCTGAGTCCTCCAGCGAGAGTGTCAGTGGATTCAGCAGCTCAGACCAGAGTTGCCTGTCTGTGATTGGAGGAGAGACAGAAGACAGCTCCTCCGTCTCCTCCTTGTGCTCCAAGCCGAGCTCCGCCCACGAGCCTCCATCTGAATTCCGCAGACGCACCTCCCCTGTTATATCCAGAAAGAGGACTTCCCCAGCCCCCAAAACCCAGGCCGTGAGTGCAGGGCAGCACCCGCAAAAGGTGGGGTGTTACAGTGCAGTCATCCTAATCCGGGGAAAGTTTTTACTGGCCGATCCACAGAGGTCTGAGCAGCTGAGGCAGTATTGATATATTGATTGACAAGCGTCCCCCAATGGTGTAGAATCCTATATGGGTCCTGGCTGAAAGAAAGGGAGCACGTAGACAAGAAAAACAGTCCTTGCATTTCCCTGACACATGTGTACTTTAAAAAGGGAATACCTGAAAATGCACCTGATTTCCAAAACTGCACATCAACGACATGCCAGCGTAGAAACTTGGTCCAGAGAATCTGATGTCATTCATGATTTCTGATGGTAAATGCAATAAGAGATACTGGACCACCAATcctaacaaatacattaaaaaatactaattatcTCTATATCTTGCTCCtatttcatttcacaaatatTTTCTGTCCGTTAATCTAATCCTGTATAGGTTTTGGATCTGTACAGTCTACACTTCACTAAGCTATATGATGGTTTTACTACAAAAAGTGGTGGGAACAAATCTGTCCTGTGGAACATTAACCCTCTCTACAGATATAACAACATAAAGAGAGATTTTATGACTGAATATGACCTTTTTTGAATATCAGCAATAAGCAACAAATTGAAGATTTCGCAAGGAAACCCGTGATTTCTCTTGTTTACAATCTGTACTCAGTGATCTAAGGAATTtatgcttgtaataaaaaccttctAAATGAAATGCTTCATGACCAGTTACCAGTTTTCTATGATGATGGTAGTTGAATTATATGCTATTTGTTGTATCTATGCTTGATTCTTGCAGTATTATTATGAGGCAGTATGATATTtaatatcatatatttttttgtgttatttcagtgCTATTAAAATGTTAGTTCATAATAATGAATCTATATTTCACTATAATATAAACTATTCTATTGTCAAAGCTAAATCAGATCATGCTATACATACAGACAAGTCTTAAGTCATCTTTTAGTTTTCTAAATTGATTTTTAAGACCATTATTCATATGTATCCTTATTCTTATGTAGAAGGTGCTGTGTCTTTGCTGTACTTTAATGTGAATTGAACCTGCCCCTTGGAATGTTGTGCCACACAGGTCTTTATAAGAATgtgaattaaacatgttttagcATGCATTTAGTGGCATATCGAGTGCGTTTCAATGTCTACCAACACATAACACATTCTGAATAGTCTTaatcttcattttcttcatttggAAAGCATGGAATGACGAAACAATAAATGGATTAAagcattcagatttttttagaCAAAAATGTAACATGGAGACATAGATCTATTACAAAAGACCACTGAATTATGCCTGTATATACAGTTCtatttgaaagtattttcaCATCCTTCATGTAAGacaatgttattcagtgatgcgtttagtttaataaatatcatCCATTCAATTGTTCATCCTCAGTTCGTCTGCTACTCCATGAGAAATCAATGTtgactgtatatattaaataaattatttgtgtgttattgttgaCTTTAAGAAGTATCTCTTATAGTTACCCATATGTGAGATGTATAATTTGAATTGTACAAGAAAAATTTGCTACTTAAATAGACACTTTCTCAGAGATGATTTCTGTtgacatataaaatgtatcaaggCCAGTTTTGGGACCatgatatacatacacacactctagAATAGAAGGATTTTCAAAGGTTAATGAAGGTTGACATAAGATTAGCATTCACAGAGGGTGGCACGATATCAAAGGACCCAATGCTTTAAAGGTATACATTCTTCTGCAGTTTAGGCTGAGCTGGCTCAGATTTGTCTCATAGGAAGAGACAATGATCcatgcatatataaaatgtttctatTGATTAAGTGTgaattattgctttatttgacTTTGAGGAGAGATAAACATCTAGAACTGCTAGTCTTGTACTGCAGGGCTGAGGTGGAAAGAACCAATTGTGGAATATTagaaacatgtttgtgtgtttttttcacgTGAGGTATTTATCTGGGTCACACTAAAAAGAGATTCAAGAGGTTTGGGGGCAAAGACCAGCAGAAAATATTTCACACACTTTGACTGGCTTTCAGAAAACCAGCTCTGATgatgtttaaaacatgtatatctCTGTGTATACTATGTGTAAAAGAAGGGTAGGACAGCTGTTTCTGTCTATGCTTGTGTGATAGAGAGAGCTTGTGGATGTTGGTATTGTGTTACACAGTTTGAACATGAGGGACGTTGCTGTGTTGGGTGGAGGTGGGCGCAGAGAGAGTTTAAGTATGTAGAGCAGTATTTCTGATATATTTGACAAGAGGCAGGCAATCATCTCTAACGTCATTGTAATGAACAGAGACCCTGTACATCCTTTAATAATGACTGGAAATCAGTGTTGCattctttcattaaaaataaaataattgtcgATTATCGATTACCGATTGTGCCCCGACTGGTTTTATTTGTCATCATATTTTGTATAGGTTTCCCAGGAAGCTGTCCACACTGGTATCATTTGATGTGGCTTATCCATCTTGTATCCTGTGCTTTCACTTTGTTTCCCAGGGTGACAGGGTTTCCAGTCTGATGTAATAATGAAAGTACATGCAATATTGCCATTGACATTGTTGCTTTCATGCCAAAGACCTTCACCAAAAAGCAGAGGTATCATTGTACGTTATTAGTctgcttttttcttatttcttgctTCACCCAACATGTTTACGTATTTATTGCTATTGTTTTCTTACCAGCTGTGTCAAATGTGGCCCAgcttcaaaatgtaataaaaaatgtttctccAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008219 True 8171 mRNA 0.49 24 46039948 46068818

Neighbor

gene id symbol gene type direction distance location
AMCG00008218 NA coding upstream 128341 45867343 ~ 45911607 (+)
AMCG00008212 myl9,LOC106565219,LOC103045271,LOC101062217,LOC100697131 coding upstream 325905 45708568 ~ 45714043 (+)
AMCG00008211 NA coding upstream 401159 45599200 ~ 45638789 (+)
AMCG00008210 NA coding upstream 550982 45488632 ~ 45488966 (+)
AMCG00008198 NA coding upstream 552981 45484630 ~ 45486967 (+)
AMCG00008220 NA coding downstream 8489 46077307 ~ 46090993 (+)
AMCG00008221 LOC102785565 coding downstream 55312 46124130 ~ 46131017 (+)
AMCG00008226 NA coding downstream 461632 46530450 ~ 46530758 (+)
AMCG00008239 NA coding downstream 1732280 47801098 ~ 47813090 (+)
AMCG00008243 slc35c2,LOC105890624 coding downstream 1827100 47895918 ~ 47908312 (+)
G29291 NA non-coding upstream 151536 45887949 ~ 45888412 (+)
G29271 NA non-coding upstream 305687 45725983 ~ 45734261 (+)
G29223 NA non-coding upstream 497742 45539769 ~ 45542206 (+)
G29153 NA non-coding upstream 661595 45378011 ~ 45378353 (+)
G29148 NA non-coding upstream 685869 45353716 ~ 45354079 (+)
G29320 NA non-coding downstream 24090 46092908 ~ 46093489 (+)
G29355 NA non-coding downstream 199857 46268675 ~ 46268989 (+)
G29358 NA non-coding downstream 409674 46478492 ~ 46478774 (+)
G29368 NA non-coding downstream 441566 46510384 ~ 46531909 (+)
G29372 NA non-coding downstream 466149 46534967 ~ 46535184 (+)
G29183 NA other upstream 598884 45440513 ~ 45441064 (+)
AMCG00008194 acot8,LOC107730625,LOC107670930,LOC107722006 other upstream 696034 45340574 ~ 45343914 (+)
AMCG00008185 NA other upstream 868120 45147397 ~ 45171828 (+)
AMCG00008177 rbm38,LOC101475440,LOC103365886,LOC105906784 other upstream 1003532 45023148 ~ 45036416 (+)
AMCG00008132 NA other upstream 2734418 43292596 ~ 43305530 (+)
G29353 NA other downstream 199073 46267891 ~ 46268327 (+)
G29418 NA other downstream 1511395 47580213 ~ 47586235 (+)
G29421 NA other downstream 1526286 47595104 ~ 47595686 (+)
AMCG00008232 ddx27 other downstream 1554134 47622952 ~ 47671421 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other downstream 1595699 47664517 ~ 47716582 (+)

Expression


Co-expression Network