AMCG00008223


Basic Information

Item Value
gene id AMCG00008223
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46137748 ~ 46150163 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008223
atgGCACTCTTCACTGAGGTCCCCCATGACATCACAGCACGCAGTGGCCAGGATGTGGAGATGGCCTGCTCCTTCCGGGGGGCTGGCTCCCCCTCCTACTCCCTGGAGATCCAGTGGTGGTACATCAGGAATCACAAGGATTGGACAGAGAAGCAGACCTGGACCACCAACCAGGTGGTGAAGGTAGCGGGCAGCAACATTTCCCACAAGCTGCGTCTGTCCAACATCAAGCCCTCCGACGAGGGGACATACGAGTGCCGGGTGATTGACTTCAGCGACAGCAAGGCCAGGCACCACAAGGTTCGGGCCTACCTCCAAGTGGAGCCTGAGCAGAGCTCTGGACTGCACCACCCCGGATCTGGATCTCAGGACACCAAGCCGGGCAGCCACGCCAATGACCGCGCCAAGCACGCTCCCTCCCAGGCTCACAGCCACCACAAAGGGGGCAGGGAACTGAAGAAACGATCTGCAGACAGCGACAATGACTGCACTGACAGCCGTGTCCCGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008223 True 510 mRNA 0.60 3 46137748 46150163

Neighbor

gene id symbol gene type direction distance location
AMCG00008222 NA coding downstream 13981 46111936 ~ 46123767 (-)
AMCG00008216 NA coding downstream 350767 45777462 ~ 45786981 (-)
AMCG00008214 NA coding downstream 376966 45737488 ~ 45760782 (-)
AMCG00008213 NA coding downstream 413321 45717392 ~ 45724427 (-)
AMCG00008215 lpin2 coding downstream 475401 45645248 ~ 45662347 (-)
AMCG00008224 ctnnbl1,LOC106566902 coding upstream 50629 46200792 ~ 46234987 (-)
AMCG00008225 ctnnbl1 coding upstream 84840 46235003 ~ 46238529 (-)
AMCG00008228 NA coding upstream 597030 46747193 ~ 46747558 (-)
AMCG00008229 cdh22,LOC106565306,LOC107553911 coding upstream 807702 46957865 ~ 46964572 (-)
AMCG00008230 cdh22 coding upstream 831173 46981336 ~ 47013277 (-)
G29294 NA non-coding downstream 158280 45979260 ~ 45979468 (-)
G29284 NA non-coding downstream 343797 45793678 ~ 45793951 (-)
G29249 NA non-coding downstream 423711 45599559 ~ 45714037 (-)
G29206 NA non-coding downstream 646858 45490007 ~ 45490890 (-)
G29192 NA non-coding downstream 675218 45461779 ~ 45462530 (-)
G29348 NA non-coding upstream 100500 46250663 ~ 46251181 (-)
G29354 NA non-coding upstream 117730 46267893 ~ 46268278 (-)
G29375 NA non-coding upstream 506071 46656234 ~ 46656566 (-)
G29377 NA non-coding upstream 573470 46723633 ~ 46723895 (-)
G29381 NA non-coding upstream 753629 46903792 ~ 46904222 (-)
G29301 NA other downstream 83402 46050695 ~ 46054346 (-)
AMCG00008192 NA other downstream 909244 45149501 ~ 45228504 (-)
G28970 NA other downstream 1719552 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 2554335 43510760 ~ 43583413 (-)
AMCG00008124 LOC105922603,LOC105919618,LOC103147358,LOC106964922,LOC102223196,LOC103465560,LOC107100266,LOC108244412 other downstream 3017584 43097111 ~ 43120164 (-)
G29361 NA other upstream 330783 46480946 ~ 46481898 (-)
AMCG00008233 NA other upstream 1429976 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 1516479 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 1973762 48123925 ~ 48124682 (-)
AMCG00008256 arfgef2 other upstream 2052458 48202621 ~ 48291443 (-)

Expression


Co-expression Network