AMCG00008228


Basic Information

Item Value
gene id AMCG00008228
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 46747193 ~ 46747558 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008228
ATGGTGAAATGTTACGGAGCTCGGGGACAACATGTGCTGTTCGTGGTTGTACATACAACCAGACAAAACTTAATGATTTGCTTAAATTGGAGTGCTTCAACCATAAACCTAAAACTAAATCAGAATGTTCCTGTCAGAGATGATAAGACGCCAACACAGGATAACCCATACCCAATGCTTTTTCTGGGTTATGAGATCCCACCAGAGAAGAGACACCACCTCAGCAGGAAGGTTGACAGACATGTCAGAAGAACA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008228 True 255 mRNA 0.43 2 46747193 46747558

Neighbor

gene id symbol gene type direction distance location
AMCG00008225 ctnnbl1 coding downstream 508664 46235003 ~ 46238529 (-)
AMCG00008224 ctnnbl1,LOC106566902 coding downstream 512206 46200792 ~ 46234987 (-)
AMCG00008223 NA coding downstream 597030 46137748 ~ 46150163 (-)
AMCG00008222 NA coding downstream 623426 46111936 ~ 46123767 (-)
AMCG00008216 NA coding downstream 960212 45777462 ~ 45786981 (-)
AMCG00008229 cdh22,LOC106565306,LOC107553911 coding upstream 210307 46957865 ~ 46964572 (-)
AMCG00008230 cdh22 coding upstream 233778 46981336 ~ 47013277 (-)
AMCG00008227 cdh22,LOC107681302,LOC107666158 coding upstream 299164 47046722 ~ 47068199 (-)
AMCG00008231 LOC107681302,LOC107587604 coding upstream 344733 47092291 ~ 47117500 (-)
AMCG00008234 ddx27,LOC107553908,LOC107681294,LOC107587605,LOC107744345 coding upstream 868295 47615853 ~ 47619787 (-)
G29377 NA non-coding downstream 23298 46723633 ~ 46723895 (-)
G29375 NA non-coding downstream 90627 46656234 ~ 46656566 (-)
G29354 NA non-coding downstream 478915 46267893 ~ 46268278 (-)
G29348 NA non-coding downstream 496012 46250663 ~ 46251181 (-)
G29294 NA non-coding downstream 767725 45979260 ~ 45979468 (-)
G29381 NA non-coding upstream 156234 46903792 ~ 46904222 (-)
G29383 NA non-coding upstream 183801 46931359 ~ 46934268 (-)
G29397 NA non-coding upstream 371079 47118637 ~ 47121378 (-)
G29403 NA non-coding upstream 662229 47409787 ~ 47410050 (-)
G29410 NA non-coding upstream 782874 47530432 ~ 47530659 (-)
G29361 NA other downstream 265295 46480946 ~ 46481898 (-)
G29301 NA other downstream 692847 46050695 ~ 46054346 (-)
AMCG00008192 NA other downstream 1518689 45149501 ~ 45228504 (-)
G28970 NA other downstream 2328997 44417874 ~ 44418196 (-)
AMCG00008144 phf20,LOC107727854 other downstream 3163780 43510760 ~ 43583413 (-)
AMCG00008233 NA other upstream 832581 47580139 ~ 47607012 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other upstream 919084 47666642 ~ 47918462 (-)
G29544 LOC100846954 other upstream 1376367 48123925 ~ 48124682 (-)
AMCG00008256 arfgef2 other upstream 1455063 48202621 ~ 48291443 (-)
AMCG00008255 NA other upstream 1663527 48411085 ~ 48418933 (-)

Expression


Co-expression Network