Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008239 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 47801098 ~ 47813090 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0007399 | nervous system development | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008239 | True | 441 | mRNA | 0.63 | 3 | 47801098 | 47813090 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008226 | NA | coding | upstream | 1270340 | 46530450 ~ 46530758 (+) |
| AMCG00008221 | LOC102785565 | coding | upstream | 1670081 | 46124130 ~ 46131017 (+) |
| AMCG00008220 | NA | coding | upstream | 1710105 | 46077307 ~ 46090993 (+) |
| AMCG00008219 | NA | coding | upstream | 1732280 | 46039948 ~ 46068818 (+) |
| AMCG00008218 | NA | coding | upstream | 1889491 | 45867343 ~ 45911607 (+) |
| AMCG00008243 | slc35c2,LOC105890624 | coding | downstream | 82828 | 47895918 ~ 47908312 (+) |
| AMCG00008248 | NA | coding | downstream | 141944 | 47955034 ~ 48001940 (+) |
| AMCG00008247 | LOC107565828 | coding | downstream | 202010 | 48015100 ~ 48030729 (+) |
| AMCG00008246 | NA | coding | downstream | 229656 | 48042746 ~ 48067543 (+) |
| AMCG00008251 | arfgef2,LOC106532188 | coding | downstream | 422597 | 48235687 ~ 48275348 (+) |
| G29431 | NA | non-coding | upstream | 185167 | 47613501 ~ 47615931 (+) |
| G29425 | NA | non-coding | upstream | 194673 | 47605140 ~ 47606425 (+) |
| G29424 | NA | non-coding | upstream | 198412 | 47602218 ~ 47602686 (+) |
| G29423 | NA | non-coding | upstream | 199997 | 47600820 ~ 47601101 (+) |
| G29422 | NA | non-coding | upstream | 201630 | 47599234 ~ 47599468 (+) |
| G29546 | NA | non-coding | downstream | 323379 | 48136469 ~ 48136724 (+) |
| G29612 | NA | non-coding | downstream | 601913 | 48415003 ~ 48419063 (+) |
| G29615 | NA | non-coding | downstream | 615885 | 48428975 ~ 48429218 (+) |
| G29661 | NA | non-coding | downstream | 861158 | 48674248 ~ 48676139 (+) |
| G29675 | NA | non-coding | downstream | 948882 | 48761972 ~ 48762297 (+) |
| AMCG00008238 | hsp70l,hsp70.3,LOC105896343,LOC105896344 | other | upstream | 84516 | 47664517 ~ 47716582 (+) |
| AMCG00008232 | ddx27 | other | upstream | 129677 | 47622952 ~ 47671421 (+) |
| G29421 | NA | other | upstream | 205412 | 47595104 ~ 47595686 (+) |
| G29418 | NA | other | upstream | 214863 | 47580213 ~ 47586235 (+) |
| G29353 | NA | other | upstream | 1532771 | 46267891 ~ 46268327 (+) |
| AMCG00008242 | hsp70.2,LOC108441608,LOC105896344,LOC105896343 | other | downstream | 50479 | 47863569 ~ 47892071 (+) |
| AMCG00008241 | LOC106596195,LOC106601018,LOC105896344,LOC105896343 | other | downstream | 100778 | 47913868 ~ 47918128 (+) |
| AMCG00008249 | NA | other | downstream | 116577 | 47929667 ~ 47941754 (+) |
| AMCG00008263 | NA | other | downstream | 1350726 | 49163816 ~ 49171017 (+) |
| AMCG00008270 | ttpal | other | downstream | 1475156 | 49288246 ~ 49295359 (+) |
