AMCG00008259


Basic Information

Item Value
gene id AMCG00008259
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48860155 ~ 48861604 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008259
ATGGAATGGTATGTTTTGGCATTGGTTCTTTGTCTAAGTTTCCCGTCTTCAGTGCAGGCAGATTGCTCTTCCCAGTGCTTAGCCTGTGCGCAACAGATCCAAGATATAGACACCGACATTAACAGTCTGGATTGCACATTAGAGTGCGAAGGAGCACTGGCGTCCGTTAGGCCTACAGAACTGGAAAAATGCGAGAAAGCTCTTCAGATTTTCCCTGTTGGTGTGACTGAAATAGGCAAGAACAAAGTGAAAAGAGAGGCAAGGGAAGACCAGCAAGGCTTGTCCATCAGCAACTTAGTTAAGCGTTATGGGGGATTCATAAAGAAagtggacaaaaacaaaattttcAGCAGTTCTCCAATTCGAGAAAATGCAAACCTTAAAGGCCTCCTCGCCAAAAAGTATGTGAATTTGCTCAGAAAGTTCGGTGAACGAGACATCCCAGAAACACTGCAAGACACCCAACTGGGAGACGAGACGTCTAAAAACGAGGAGGTGGTCTATAATGATGACAATACCGCTATTAATGAAGTAAAACGATACGGAGGGTTCTTGCGGAAATTTGGCCCTAAAAGAAGCTATGACTCTGTGGAACAAAGTAGCCAAGAAGAGTTGCAAAAGAGATATGGAGGTTTCATGCGAAGAATCCGGCCAAAGCTCAAGTGGGATAATCAGAAGAGATATGGCGGGTTTCTAAGACGCCATTTCAAGATATCAGTTAGGTCAGAAAAAGAACCTAGCTCGTATCCTGATGATGGGGTTGACCTATAG

Function

GO:

id name namespace
GO:0031628 opioid receptor binding molecular_function

KEGG:

id description
K15840 PDYN, PENKB; proenkephalin B (prodynorphin)

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008259 True 771 mRNA 0.44 2 48860155 48861604

Neighbor

gene id symbol gene type direction distance location
AMCG00008260 NA coding downstream 20810 48838148 ~ 48839345 (-)
AMCG00008257 NA coding downstream 162321 48674528 ~ 48697834 (-)
AMCG00008258 LOC100703625,LOC102206431,LOC101476705,LOC103360233,LOC102296182,LOC105026470 coding downstream 216213 48484395 ~ 48643942 (-)
AMCG00008254 pard6g,LOC107702404,LOC105910269,LOC108410561,LOC107754812,LOC107672872,LOC106570232 coding downstream 657693 48042673 ~ 48202462 (-)
AMCG00008244 sys1 coding downstream 972856 47882297 ~ 47887299 (-)
AMCG00008261 NA coding upstream 282569 49144173 ~ 49169545 (-)
AMCG00008265 ttpal,LOC107673079,LOC107716173 coding upstream 408016 49269620 ~ 49280998 (-)
AMCG00008266 NA coding upstream 437929 49299533 ~ 49324003 (-)
AMCG00008267 hnf4a,LOC107737506,LOC107673078,LOC107568408 coding upstream 483884 49345488 ~ 49361511 (-)
AMCG00008269 NA coding upstream 551788 49413392 ~ 49415125 (-)
G29695 NA non-coding downstream 17542 48842351 ~ 48842613 (-)
G29694 NA non-coding downstream 26333 48833539 ~ 48833822 (-)
G29676 NA non-coding downstream 97858 48761972 ~ 48762297 (-)
G29673 NA non-coding downstream 127564 48732260 ~ 48732591 (-)
G29656 NA non-coding downstream 206221 48565667 ~ 48653934 (-)
G29717 LOC105897865 non-coding upstream 62509 48924113 ~ 48940099 (-)
G29723 NA non-coding upstream 105434 48967038 ~ 48967343 (-)
G29806 NA non-coding upstream 466969 49328573 ~ 49328840 (-)
G29825 NA non-coding upstream 538565 49400169 ~ 49400479 (-)
G29826 NA non-coding upstream 539046 49400650 ~ 49400872 (-)
AMCG00008255 NA other downstream 441222 48411085 ~ 48418933 (-)
AMCG00008256 arfgef2 other downstream 568712 48202621 ~ 48291443 (-)
G29544 LOC100846954 other downstream 735473 48123925 ~ 48124682 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other downstream 941693 47666642 ~ 47918462 (-)
AMCG00008233 NA other downstream 1253143 47580139 ~ 47607012 (-)
AMCG00008264 NA other upstream 314121 49175725 ~ 49253244 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other upstream 635796 49497400 ~ 49537281 (-)
G29928 NA other upstream 934367 49795971 ~ 49905089 (-)
G29974 LOC101154678 other upstream 1192221 50053825 ~ 50054102 (-)
G30054 NA other upstream 1412134 50273738 ~ 50274183 (-)

Expression


Co-expression Network