AMCG00008260


Basic Information

Item Value
gene id AMCG00008260
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48838148 ~ 48839345 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008260
atgcagagagaggcACTTCAGCTTAGGGAGGAGAAAGATCAGATTGCATTGGCTAATGCTAAGTTAGAGCAGAGCATTGAGGTGCTAAAGGAAGAGTTGCAGAAGCAGATGCATAGTGAAAGAAAAGAGACCATGAAACTTATTTACTATAAAAGAACATTTGCAATGGATGGTGAACAGAGCTTAAGTGTGGCAGACAAGGTTGGAGAGTTAAATGAAGAGGTGCTGTTCTGGCAGGGCGAGTGTGAAGAAGTGAAGGGAGAGTTGGACAAGTTCTTAGAGAACAAGAATGAACCATATACGCAGAAAATAGATACACGGGATGGTATAAGGATGCATTTAGGACTCAGGGAACAGGCATCAGGCTCTGCTCAGTGTTCATTTGATACTGTCAGAGAAATGGTTCAGGACATAGTCAGAAGTGGGGTGTGTgacttgaatGCTGATGTAACACTTCTATCTGAGAGAGGAAATGGTGGAGACAGAGTAGTTAGTTTGTGCTTACATTGGGTACACAAAACCGTAGGAGAAAGCGGGACAGTTAGATTGATCAGAACTGTATGCAAGGCAGTGCAGGAAAGTGGCTGTGATAAAAGTGGAAAACCAGTGCAATTCAAGACAGTTCTGTTAGGCAAggataaatctgaatttgtgccACTGGTATTATTCAAAGGTTACAGAATCAACATTACTCTTTGCAGTGCAGCTGGGTTTTTTTACCTGCTCTCTGATTTGCTGGAATTCAGTAGAGAaattcagcatgaaaacaaattggtggAGCTGTTTTTGCTGATCTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008260 True 798 mRNA 0.42 3 48838148 48839345

Neighbor

gene id symbol gene type direction distance location
AMCG00008257 NA coding downstream 140314 48674528 ~ 48697834 (-)
AMCG00008258 LOC100703625,LOC102206431,LOC101476705,LOC103360233,LOC102296182,LOC105026470 coding downstream 194206 48484395 ~ 48643942 (-)
AMCG00008254 pard6g,LOC107702404,LOC105910269,LOC108410561,LOC107754812,LOC107672872,LOC106570232 coding downstream 635686 48042673 ~ 48202462 (-)
AMCG00008244 sys1 coding downstream 950849 47882297 ~ 47887299 (-)
AMCG00008240 ssr1,LOC108424590 coding downstream 1045627 47783301 ~ 47792521 (-)
AMCG00008259 NA coding upstream 20810 48860155 ~ 48861604 (-)
AMCG00008261 NA coding upstream 304828 49144173 ~ 49169545 (-)
AMCG00008265 ttpal,LOC107673079,LOC107716173 coding upstream 430275 49269620 ~ 49280998 (-)
AMCG00008266 NA coding upstream 460188 49299533 ~ 49324003 (-)
AMCG00008267 hnf4a,LOC107737506,LOC107673078,LOC107568408 coding upstream 506143 49345488 ~ 49361511 (-)
G29694 NA non-coding downstream 4326 48833539 ~ 48833822 (-)
G29676 NA non-coding downstream 75851 48761972 ~ 48762297 (-)
G29673 NA non-coding downstream 105557 48732260 ~ 48732591 (-)
G29656 NA non-coding downstream 184214 48565667 ~ 48653934 (-)
G29595 NA non-coding downstream 505206 48332108 ~ 48332942 (-)
G29695 NA non-coding upstream 3006 48842351 ~ 48842613 (-)
G29717 LOC105897865 non-coding upstream 84768 48924113 ~ 48940099 (-)
G29723 NA non-coding upstream 127693 48967038 ~ 48967343 (-)
G29806 NA non-coding upstream 489228 49328573 ~ 49328840 (-)
G29825 NA non-coding upstream 560824 49400169 ~ 49400479 (-)
AMCG00008255 NA other downstream 419215 48411085 ~ 48418933 (-)
AMCG00008256 arfgef2 other downstream 546705 48202621 ~ 48291443 (-)
G29544 LOC100846954 other downstream 713466 48123925 ~ 48124682 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other downstream 919686 47666642 ~ 47918462 (-)
AMCG00008233 NA other downstream 1231136 47580139 ~ 47607012 (-)
AMCG00008264 NA other upstream 336380 49175725 ~ 49253244 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other upstream 658055 49497400 ~ 49537281 (-)
G29928 NA other upstream 956626 49795971 ~ 49905089 (-)
G29974 LOC101154678 other upstream 1214480 50053825 ~ 50054102 (-)
G30054 NA other upstream 1434393 50273738 ~ 50274183 (-)

Expression


Co-expression Network