AMCG00008262 (stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842)


Basic Information

Item Value
gene id AMCG00008262
gene name stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 48923864 ~ 48940095 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008262
GTAAACAacatatatagatattacagagtaaagtatatatttttctgtgtgaCCCGGTTTAGATTACGCtaagtatacattttattttaaggtctaGTACAGCTTCCCCCTTTGTAAAGAATGGTATATTCCGGGTGTACCCGCCCCCTTCATTCAATGATTTGGATGTCCATGTTTATTTAGTTCAAACAGTTTGGGGATAGGGAAGCGGCTGAAGcccaaagtttattttaaacaataacaagCGGTAGGGAAAGTCAACCCTTGCATTGTAAATCATCCCCATCTTTGGAAAAAAGTAATGAGGAGAGGCAAACCGAATTTCCATGCACATTCACGTTTAACGAAAAGAAACCCATGGATACAGGTGACGGGGGGAGGAGAAGGACAAAAAGTGTGCGTGCTGGCAGGAGAGATGGGGCTCCGAATGCGAAGTTGAAAAGGGAAGTGGGGAAAGTTTTGAAATCGTTGACAGTGGGGGAAGGTGAGGGCAATGCAGTCCCGATGGAGGAAGATTATTTCTCCAACAGCATTGCAAAAAGCGAGAAACCGGGGCGGAAAGTACTCGCGCCGCGCTACAGCCTGCTGCGGGAGGTTGGAAGGGGCAGCTATGGCGTGGTGTACGAAGCCATTGCTCGGAGGTCGGGGGCAAGGGTAGCAGTTAAGAAACTTCGTTGTGACGCTCCCGAAAATGTGGAGCTCGCTCTGGCTGAGTTCTGGGCCTTGGCCAGTCTGGAGAGGCGGCACGAAAACGTGGTGCAGTTGGAGGAATGCGTGTTGCAGAGGAACGGCCTAGCCCAGAAAATGAGCCATGGGAACAAGCGATCCGAGCAATACCTGCGTTTGGTTGAGACGTCGCTTAAAGGGGAGAGAGTTTTAGGATACCCCGAAGAGCCATGCTACCTCTGGTTTGTGATGGAGTTCTGTGAAGGTGGTGACCTGAACCAGTTCATCCTGTCCAGGAGACCAGACCCAGTGACCAACAACAGCTTTATGCTTCAACTTACAAGTGCCGTGGCCTTCttgcacaaaaacaatattgttcaCAGGGACCTGAAACCAGACAACATCCTCATCTCGGAGAAGTCCGGAGTTCCGGTGCTCAAAGTGGCCGACTTTGGGCTCAGCAAAGTATGTGCAggtttgggggggagggggaaagagggagaagaTGGGAACAAGAATGTCAACGTGAACAAGTTCTGGCTCTCATCGGCCTGTGGCTCTGACTTCTACATGGCGCCAGAGGTATGGGAAGGACACTACACTGCCAAAGCGGACATATTTGCCCTGGGCATAATCATGTGGGCAATGATTGAGAGGATAACCTTCATAGATGCGGAGTCCAAGAGAGAGCTCCTGGGCACATACATCAGGCAGGGTACAGAGATAGTGCCTGTGGGGGAAGCGCTGCTAGAAAACCCAAAGATGGTACTCCACATCCCTCAGAAACGGAGGACTTCCATGTCAGATGGTATCAAACAGCTCCTAAAGGACATGCTCGCGGTCAATCCCCAAGATCGCCCTGATGCTTTTGAGCTGGAGACCAGAATGGACCAGGTTACGTGTGCTGCTTGACTTTAAGAAGCTGAATGAGAggattcaattttctttttgtttcagAAATGTTTACTCAAAACCCCAGGATCCCACATTTTACCAAGGTGAAAAAGGGACTCTGTGATGATCTTCCAACTGTGAAGAAACTTCCATCTCAAGAGCTGTAATGTGAAAAGAATATCAAAAGGAGAACAAACGAGGAGAGGCGAGTTATAATTCAGGATGCAACAATGGAAACGCTACGCAATAACGTTGCACAGGAAGAATTAGGtttattcaatttattcttagtttttccatttctcctttagtttttcttttatgacTTTAACCTTGTTTACACCATGGCCTGTTTCTTCTAATTTTAGCAGAAGAAAAACTGgcttatgcattttgtttttgttgcagagggcatgaaagtaaaaaaacaaattataattaaaaaatatatatatataaaaaaa

Function

symbol description
stk35 Predicted to enable protein serine/threonine kinase activity. Predicted to be involved in meiotic cell cycle. Predicted to act upstream of or within protein phosphorylation. Predicted to be active in nucleus. Is expressed in solid lens vesicle. Orthologous to human STK35 (serine/threonine kinase 35).

NR:

description
PREDICTED: serine/threonine-protein kinase 35-like

GO: NA

KEGG:

id description
K08859 STK35, PDIK1, CLIK1; serine/threonine kinase 35

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008262 True 2024 mRNA 0.46 3 48923864 48940095

Neighbor

gene id symbol gene type direction distance location
AMCG00008250 NA coding upstream 449332 48462293 ~ 48474532 (+)
AMCG00008253 stau1 coding upstream 547793 48347747 ~ 48376071 (+)
AMCG00008252 cse1l coding upstream 597726 48292639 ~ 48326138 (+)
AMCG00008251 arfgef2,LOC106532188 coding upstream 648516 48235687 ~ 48275348 (+)
AMCG00008246 NA coding upstream 856321 48042746 ~ 48067543 (+)
AMCG00008272 NA coding downstream 529194 49469289 ~ 49471615 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding downstream 609811 49549906 ~ 49560080 (+)
AMCG00008281 NA coding downstream 646972 49587067 ~ 49596793 (+)
AMCG00008283 NA coding downstream 939884 49879979 ~ 49881352 (+)
AMCG00008291 NA coding downstream 1418892 50358987 ~ 50359865 (+)
G29692 NA non-coding upstream 103170 48820475 ~ 48820694 (+)
G29677 NA non-coding upstream 119959 48762685 ~ 48803905 (+)
G29675 NA non-coding upstream 161567 48761972 ~ 48762297 (+)
G29661 NA non-coding upstream 247725 48674248 ~ 48676139 (+)
G29615 NA non-coding upstream 494646 48428975 ~ 48429218 (+)
G29722 NA non-coding downstream 26861 48966956 ~ 48967220 (+)
G29742 NA non-coding downstream 165118 49105213 ~ 49105444 (+)
G29747 NA non-coding downstream 197421 49137516 ~ 49192216 (+)
G29748 NA non-coding downstream 199045 49139140 ~ 49147225 (+)
G29813 NA non-coding downstream 403943 49344038 ~ 49348022 (+)
AMCG00008249 NA other upstream 982110 47929667 ~ 47941754 (+)
AMCG00008241 LOC106596195,LOC106601018,LOC105896344,LOC105896343 other upstream 1005736 47913868 ~ 47918128 (+)
AMCG00008242 hsp70.2,LOC108441608,LOC105896344,LOC105896343 other upstream 1031793 47863569 ~ 47892071 (+)
AMCG00008238 hsp70l,hsp70.3,LOC105896343,LOC105896344 other upstream 1207282 47664517 ~ 47716582 (+)
AMCG00008232 ddx27 other upstream 1252443 47622952 ~ 47671421 (+)
AMCG00008263 NA other downstream 223721 49163816 ~ 49171017 (+)
AMCG00008270 ttpal other downstream 348151 49288246 ~ 49295359 (+)
AMCG00008271 NA other downstream 464761 49404856 ~ 49418746 (+)
AMCG00008279 NA other downstream 899417 49839512 ~ 49858576 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other downstream 1382618 50322713 ~ 50356404 (+)

Expression


Co-expression Network