AMCG00008264


Basic Information

Item Value
gene id AMCG00008264
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 49175725 ~ 49253244 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008264
ATGGTGAGACTGATGTCAAGGTGTTATGAGAGCTGTGGTGATGAAAAGATGATGGAGGTGGAGTCGGCATATTCAGATTTTATCACCTGTGATCGTACTGGTCGCAGGAATGCGGTGCCTGACATCAAAGGTGAAGGGACGGTGGTGGGGACAAGCGAGTTAACCAAAGACATGGCTCAGATGGACCTAAAAGTGCTAGaacatgaaaattaa
>TU37266
CCAAAGAAGGCAGGGAAGTTTCCAGCCTTTGTTACACCGAAGAGCTGCTGCATTGTAACAAGTGGACGCAAGAAACTACAATTATCGCATGGCTAAGGTGTTATGAGAGCTGTGGTGATGAAAAGATGATGGAGGTGGAGTCGGCATATTCAGATTTTATCACCTGTGATCGTACTGGTCGCAGGAATGCGGTGCCTGACATCAAAGGTGAAGGGACGGTGGTGGGGACAAGCGAGTTAACCAAAGACATGGCTCAGATGGACCTAAAAGTGCTAGgtCAGGGCAGCTCTAATCAACACCTCCAATCTCGTCTCATTGATTGGAGTCAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008264 False 213 mRNA 0.46 3 49175725 49251899
TU37266 True 330 lncRNA 0.48 3 49182768 49253244

Neighbor

gene id symbol gene type direction distance location
AMCG00008261 NA coding downstream 6180 49144173 ~ 49169545 (-)
AMCG00008259 NA coding downstream 314121 48860155 ~ 48861604 (-)
AMCG00008260 NA coding downstream 336380 48838148 ~ 48839345 (-)
AMCG00008257 NA coding downstream 477891 48674528 ~ 48697834 (-)
AMCG00008258 LOC100703625,LOC102206431,LOC101476705,LOC103360233,LOC102296182,LOC105026470 coding downstream 531783 48484395 ~ 48643942 (-)
AMCG00008265 ttpal,LOC107673079,LOC107716173 coding upstream 16376 49269620 ~ 49280998 (-)
AMCG00008266 NA coding upstream 46289 49299533 ~ 49324003 (-)
AMCG00008267 hnf4a,LOC107737506,LOC107673078,LOC107568408 coding upstream 92244 49345488 ~ 49361511 (-)
AMCG00008269 NA coding upstream 160148 49413392 ~ 49415125 (-)
AMCG00008268 gdap1l1,LOC102776784 coding upstream 225089 49478333 ~ 49479077 (-)
G29723 NA non-coding downstream 208382 48967038 ~ 48967343 (-)
G29717 LOC105897865 non-coding downstream 235626 48924113 ~ 48940099 (-)
G29695 NA non-coding downstream 333112 48842351 ~ 48842613 (-)
G29694 NA non-coding downstream 341903 48833539 ~ 48833822 (-)
G29676 NA non-coding downstream 413428 48761972 ~ 48762297 (-)
G29806 NA non-coding upstream 75329 49328573 ~ 49328840 (-)
G29825 NA non-coding upstream 146925 49400169 ~ 49400479 (-)
G29826 NA non-coding upstream 147406 49400650 ~ 49400872 (-)
G29827 NA non-coding upstream 148805 49402049 ~ 49402258 (-)
G29834 NA non-coding upstream 158112 49411356 ~ 49417214 (-)
AMCG00008255 NA other downstream 756792 48411085 ~ 48418933 (-)
AMCG00008256 arfgef2 other downstream 884282 48202621 ~ 48291443 (-)
G29544 LOC100846954 other downstream 1051043 48123925 ~ 48124682 (-)
AMCG00008245 si:ch211-199o1.2,LOC105896344,LOC105896343,LOC108441608,LOC107668030,LOC108418094,LOC101067989 other downstream 1257263 47666642 ~ 47918462 (-)
AMCG00008233 NA other downstream 1568713 47580139 ~ 47607012 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other upstream 244156 49497400 ~ 49537281 (-)
G29928 NA other upstream 542727 49795971 ~ 49905089 (-)
G29974 LOC101154678 other upstream 800581 50053825 ~ 50054102 (-)
G30054 NA other upstream 1020494 50273738 ~ 50274183 (-)
AMCG00008298 NA other upstream 1270743 50523987 ~ 50528036 (-)

Expression


Co-expression Network