Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008272 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 49469289 ~ 49471615 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0022604 | regulation of cell morphogenesis | biological_process |
| GO:0007010 | cytoskeleton organization | biological_process |
| GO:0019915 | lipid storage | biological_process |
| GO:0016020 | membrane | cellular_component |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008272 | True | 729 | mRNA | 0.42 | 2 | 49469289 | 49471615 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008262 | stk35,LOC105016730,LOC106583621,LOC103372836,LOC104935842 | coding | upstream | 529194 | 48923864 ~ 48940095 (+) |
| AMCG00008250 | NA | coding | upstream | 994757 | 48462293 ~ 48474532 (+) |
| AMCG00008253 | stau1 | coding | upstream | 1093218 | 48347747 ~ 48376071 (+) |
| AMCG00008252 | cse1l | coding | upstream | 1143151 | 48292639 ~ 48326138 (+) |
| AMCG00008251 | arfgef2,LOC106532188 | coding | upstream | 1193941 | 48235687 ~ 48275348 (+) |
| AMCG00008280 | jph2,LOC107707015,LOC108275945 | coding | downstream | 78291 | 49549906 ~ 49560080 (+) |
| AMCG00008281 | NA | coding | downstream | 115452 | 49587067 ~ 49596793 (+) |
| AMCG00008283 | NA | coding | downstream | 408364 | 49879979 ~ 49881352 (+) |
| AMCG00008291 | NA | coding | downstream | 887372 | 50358987 ~ 50359865 (+) |
| AMCG00008292 | NA | coding | downstream | 894829 | 50366444 ~ 50403958 (+) |
| G29823 | NA | non-coding | upstream | 89915 | 49368645 ~ 49379374 (+) |
| G29813 | NA | non-coding | upstream | 121267 | 49344038 ~ 49348022 (+) |
| G29747 | NA | non-coding | upstream | 277073 | 49137516 ~ 49192216 (+) |
| G29748 | NA | non-coding | upstream | 322064 | 49139140 ~ 49147225 (+) |
| G29742 | NA | non-coding | upstream | 363845 | 49105213 ~ 49105444 (+) |
| G29848 | NA | non-coding | downstream | 43869 | 49515484 ~ 49938346 (+) |
| G29853 | NA | non-coding | downstream | 72747 | 49544362 ~ 49544731 (+) |
| G29877 | NA | non-coding | downstream | 324829 | 49796444 ~ 49797983 (+) |
| G29883 | tp53rk | non-coding | downstream | 366390 | 49838005 ~ 49839324 (+) |
| G29973 | NA | non-coding | downstream | 582098 | 50053713 ~ 50053971 (+) |
| AMCG00008271 | NA | other | upstream | 50543 | 49404856 ~ 49418746 (+) |
| AMCG00008270 | ttpal | other | upstream | 173930 | 49288246 ~ 49295359 (+) |
| AMCG00008263 | NA | other | upstream | 298272 | 49163816 ~ 49171017 (+) |
| AMCG00008249 | NA | other | upstream | 1527535 | 47929667 ~ 47941754 (+) |
| AMCG00008241 | LOC106596195,LOC106601018,LOC105896344,LOC105896343 | other | upstream | 1551161 | 47913868 ~ 47918128 (+) |
| AMCG00008279 | NA | other | downstream | 367897 | 49839512 ~ 49858576 (+) |
| AMCG00008288 | ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 | other | downstream | 851098 | 50322713 ~ 50356404 (+) |
| G30166 | NA | other | downstream | 1954966 | 51426581 ~ 51428055 (+) |
| G30232 | NA | other | downstream | 2629147 | 52100762 ~ 52101524 (+) |
| G30299 | NA | other | downstream | 2906714 | 52378329 ~ 52378776 (+) |
