AMCG00008294


Basic Information

Item Value
gene id AMCG00008294
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 50451310 ~ 50460054 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008294
ATGAGCTCGTGCAGAGACTCGGGGCACTCGGCTGGGCATGGCATCCGGTACCCCCGCTCCACCTGGTCTAGCACCTCCCGATTCACCATCCCTACAGAGCGACAGGAGGAGACAACACCAGCAATGTTCAGTAAGAGCCTCTCAGAATCCCTGCGCGTGATCTTCCCAAAGTACCACCTGAGGAAGGAGATGGAAAAATTTGGGATCGAGTGGCAGGGATGGGATgaaggaggatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008294 True 237 mRNA 0.57 2 50451310 50460054

Neighbor

gene id symbol gene type direction distance location
AMCG00008292 NA coding upstream 47352 50366444 ~ 50403958 (+)
AMCG00008291 NA coding upstream 91445 50358987 ~ 50359865 (+)
AMCG00008283 NA coding upstream 569958 49879979 ~ 49881352 (+)
AMCG00008281 NA coding upstream 854517 49587067 ~ 49596793 (+)
AMCG00008280 jph2,LOC107707015,LOC108275945 coding upstream 891230 49549906 ~ 49560080 (+)
AMCG00008296 NA coding downstream 102700 50562754 ~ 50582183 (+)
AMCG00008304 NA coding downstream 873249 51333303 ~ 51336685 (+)
AMCG00008309 NA coding downstream 1075416 51535470 ~ 51542896 (+)
AMCG00008308 pfdn4,pfd4,LOC107697845,LOC107758785 coding downstream 1092552 51552606 ~ 51560087 (+)
AMCG00008310 NA coding downstream 1192310 51652364 ~ 51657000 (+)
G30012 NA non-coding upstream 2345 50445857 ~ 50448965 (+)
G30010 ub2v1,LOC105022328,LOC107557526,LOC106572481,LOC108425074 non-coding upstream 140101 50308100 ~ 50311209 (+)
G30017 NA non-coding upstream 177127 50273735 ~ 50274183 (+)
G30016 NA non-coding upstream 183860 50267223 ~ 50267450 (+)
G29991 NA non-coding upstream 295048 50155704 ~ 50156262 (+)
G30073 NA non-coding downstream 68479 50528533 ~ 50530747 (+)
G30078 NA non-coding downstream 75720 50535774 ~ 50535987 (+)
G30083 NA non-coding downstream 95330 50555384 ~ 50555589 (+)
G30099 NA non-coding downstream 290326 50750380 ~ 50752307 (+)
G30102 NA non-coding downstream 332021 50792075 ~ 50792290 (+)
AMCG00008288 ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 other upstream 94906 50322713 ~ 50356404 (+)
AMCG00008279 NA other upstream 592734 49839512 ~ 49858576 (+)
AMCG00008271 NA other upstream 1032564 49404856 ~ 49418746 (+)
AMCG00008270 ttpal other upstream 1155951 49288246 ~ 49295359 (+)
AMCG00008263 NA other upstream 1280293 49163816 ~ 49171017 (+)
G30166 NA other downstream 966527 51426581 ~ 51428055 (+)
G30232 NA other downstream 1640708 52100762 ~ 52101524 (+)
G30299 NA other downstream 1918275 52378329 ~ 52378776 (+)
G30300 NA other downstream 1921287 52381341 ~ 52382418 (+)
AMCG00008334 prex1 other downstream 2531231 52991285 ~ 53087480 (+)

Expression


Co-expression Network