Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00008296 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 50562754 ~ 50582183 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0071805 | potassium ion transmembrane transport | biological_process |
| GO:0034765 | regulation of ion transmembrane transport | biological_process |
| GO:0051260 | protein homooligomerization | biological_process |
| GO:0008076 | voltage-gated potassium channel complex | cellular_component |
| GO:0005251 | delayed rectifier potassium channel activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00008296 | True | 1107 | mRNA | 0.58 | 2 | 50562754 | 50582183 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00008294 | NA | coding | upstream | 102700 | 50451310 ~ 50460054 (+) |
| AMCG00008292 | NA | coding | upstream | 158796 | 50366444 ~ 50403958 (+) |
| AMCG00008291 | NA | coding | upstream | 202889 | 50358987 ~ 50359865 (+) |
| AMCG00008283 | NA | coding | upstream | 681402 | 49879979 ~ 49881352 (+) |
| AMCG00008281 | NA | coding | upstream | 965961 | 49587067 ~ 49596793 (+) |
| AMCG00008304 | NA | coding | downstream | 751120 | 51333303 ~ 51336685 (+) |
| AMCG00008309 | NA | coding | downstream | 953287 | 51535470 ~ 51542896 (+) |
| AMCG00008308 | pfdn4,pfd4,LOC107697845,LOC107758785 | coding | downstream | 970423 | 51552606 ~ 51560087 (+) |
| AMCG00008310 | NA | coding | downstream | 1070181 | 51652364 ~ 51657000 (+) |
| AMCG00008316 | NA | coding | downstream | 1684250 | 52266433 ~ 52311801 (+) |
| G30083 | NA | non-coding | upstream | 7165 | 50555384 ~ 50555589 (+) |
| G30078 | NA | non-coding | upstream | 26767 | 50535774 ~ 50535987 (+) |
| G30073 | NA | non-coding | upstream | 32007 | 50528533 ~ 50530747 (+) |
| G30012 | NA | non-coding | upstream | 113789 | 50445857 ~ 50448965 (+) |
| G30010 | ub2v1,LOC105022328,LOC107557526,LOC106572481,LOC108425074 | non-coding | upstream | 251545 | 50308100 ~ 50311209 (+) |
| G30099 | NA | non-coding | downstream | 168197 | 50750380 ~ 50752307 (+) |
| G30102 | NA | non-coding | downstream | 209892 | 50792075 ~ 50792290 (+) |
| G30104 | NA | non-coding | downstream | 215937 | 50798120 ~ 50798319 (+) |
| G30132 | NA | non-coding | downstream | 424194 | 51006377 ~ 51010069 (+) |
| G30139 | NA | non-coding | downstream | 485957 | 51068140 ~ 51068707 (+) |
| AMCG00008288 | ube2v1,LOC103467757,LOC101171992,LOC103139104,LOC103354371,LOC107090722 | other | upstream | 206350 | 50322713 ~ 50356404 (+) |
| AMCG00008279 | NA | other | upstream | 704178 | 49839512 ~ 49858576 (+) |
| AMCG00008271 | NA | other | upstream | 1144008 | 49404856 ~ 49418746 (+) |
| AMCG00008270 | ttpal | other | upstream | 1267395 | 49288246 ~ 49295359 (+) |
| AMCG00008263 | NA | other | upstream | 1391737 | 49163816 ~ 49171017 (+) |
| G30166 | NA | other | downstream | 844398 | 51426581 ~ 51428055 (+) |
| G30232 | NA | other | downstream | 1518579 | 52100762 ~ 52101524 (+) |
| G30299 | NA | other | downstream | 1796146 | 52378329 ~ 52378776 (+) |
| G30300 | NA | other | downstream | 1799158 | 52381341 ~ 52382418 (+) |
| AMCG00008334 | prex1 | other | downstream | 2409102 | 52991285 ~ 53087480 (+) |
