AMCG00008303 (zfp64,LOC106572631,LOC104953815)


Basic Information

Item Value
gene id AMCG00008303
gene name zfp64,LOC106572631,LOC104953815
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 51027268 ~ 51036822 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008303
TCCGGAGCAACACAAGTACTGGTTGAAGTCAGTCCAGACATCCATATTTGTGGACTGTGTAAGCAGCAGTATAACAACTTTGACATTTTTCTGGCCCACAAGCAAAATGGCTGCCATGTGCACACCTCTGACCCTACCGCCCCCAGCACTGTTCACACTATTACAGATTCCAGCTCCGAATTTGTCTTTGAGGAAACTTACCAGGCCTGCACTCTGAGGAAGATCCAAACGAAAGCCCCCAAAACGCCTtccaaaaaattaaaacctgcACTCACTTCCAAGAAACTCTCCTGCTGCTTCTCAGgttgCACCTTCAAAACCCAATATGGTCAAAAAGATATGGAAAGACACCTTAAAACTCACACAGGAGAGAAGCCCTTCGAGTGCGAGGTATGCAGTAAGCGCTTCAGCCGCAGAGACAAGCTGACCATGCATGGCCGCTCGCACACGGGGGAGAAGCCACACAAGTGCAAGTACTGCGAGTACGCGGCCGCCGACAGCAGCAGCCTGAAGAAGCACCTCCGCATCCACTACGACGAACGTCCCTTCAAGTGCCAGATCTGCCCCTACGCCAGTCGCAACTCCAGCCAGCTCACCGTGCACCTGCGCTCGCACACAGGTAATGTCTCCTGCCCACCGCCCTATAAGGAAAAGAGCTCAGCTCCCATTTTCACCAGGAAgtcaaataaaggaaaatgttgtGACCCGCAGCACAAAGTGGCAGTGGCACAG

Function

symbol description
zfp64 Predicted to enable metal ion binding activity. Predicted to be involved in positive regulation of transcription by RNA polymerase II. Predicted to be active in nucleus. Orthologous to human ZFP64 (ZFP64 zinc finger protein).

NR:

description
PREDICTED: zinc finger protein 64 homolog, isoforms 1 and 2-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008303 True 732 mRNA 0.52 4 51027268 51036822

Neighbor

gene id symbol gene type direction distance location
AMCG00008301 NA coding downstream 90468 50924052 ~ 50936800 (-)
AMCG00008302 atp9a,LOC106567116 coding downstream 110888 50840260 ~ 50916380 (-)
AMCG00008299 NA coding downstream 213462 50810379 ~ 50813806 (-)
AMCG00008300 nfatc2 coding downstream 228949 50792076 ~ 50798319 (-)
AMCG00008297 kcng1,LOC102780788,LOC107711602,LOC107558732 coding downstream 467947 50550065 ~ 50559321 (-)
AMCG00008305 NA coding upstream 384652 51421474 ~ 51441540 (-)
AMCG00008306 NA coding upstream 434397 51471219 ~ 51497212 (-)
AMCG00008307 NA coding upstream 473932 51510754 ~ 51515400 (-)
AMCG00008311 NA coding upstream 706587 51743409 ~ 51743798 (-)
AMCG00008312 NA coding upstream 1031660 52068482 ~ 52069809 (-)
G30108 NA non-coding downstream 274094 50750421 ~ 50753174 (-)
G30096 NA non-coding downstream 367092 50659944 ~ 50660176 (-)
G30094 NA non-coding downstream 372755 50654219 ~ 50654513 (-)
G30091 NA non-coding downstream 413365 50613588 ~ 50613903 (-)
G30086 NA non-coding downstream 425218 50601457 ~ 50602050 (-)
G30143 NA non-coding upstream 31318 51068140 ~ 51068561 (-)
G30149 NA non-coding upstream 145852 51182674 ~ 51182933 (-)
G30170 NA non-coding upstream 383825 51420647 ~ 51421417 (-)
G30172 NA non-coding upstream 388509 51425331 ~ 51425584 (-)
G30218 NA non-coding upstream 717261 51754083 ~ 51754304 (-)
AMCG00008298 NA other downstream 499232 50523987 ~ 50528036 (-)
G30054 NA other downstream 753085 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 973166 50053825 ~ 50054102 (-)
G29928 NA other downstream 1122179 49795971 ~ 49905089 (-)
AMCG00008273 gdap1l1,LOC107599436,LOC107664149,LOC107594051,LOC107707014 other downstream 1489987 49497400 ~ 49537281 (-)
AMCG00008318 NA other upstream 1292414 52329236 ~ 52339097 (-)
AMCG00008325 znf341,LOC106566899 other upstream 1344234 52381056 ~ 52384567 (-)

Expression


Co-expression Network