AMCG00008339


Basic Information

Item Value
gene id AMCG00008339
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 53300476 ~ 53303340 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008339
TCCAGATGTGCACAAATGCACGTTAGCATTTGATAACAGGAATCCAGATACGGTGTTCACTAGAAAAGATGCTGGTATTGTGCGGGCTGGTGTTGGTTTCCACACCGGTCACATTGCAGTCACAGACGTACCTCTGGAAGGATGACGTCACCGATGAGCCAGTCACGTGCGACAAGTGTCCGCCTGGCACGCGCGTCCTGCGGCACTGCACGAGACACAGCCGCACCGCGTGCGCGCCCTGTCCCGCGCTGCACTACACCGAGTTCTGGAACTACCTCGAGCAGTGCCGCTACTGCAACAACTTCTGCGCAGACACGCAGCTGGAGAAGCAGCCGTGCAGCAGCACCCACAACCGGCTGTGCGAGTGCAAGGCTGGCTATTACCTGCGGGATGAGATGTGCGCAAAGCACAGTGCCTGCCCTCCTGGAGAAGGCGTCGCTGTGAATGGAACTGCGTATGAAGATGCGCAGTGTGAACTGTGTCCGGATGGCTTCTACTCCTCGGTGGCCTCCAGCACACAGCGCTGCCTCCAGCACAGCCAGTGCCAGCCAGAGCAGAGGGCCATAGAGGGCGACGAGAAACAGGACACCTTCTGCACTGCCTGCACGACACCTGTGAGCATCCACACGGACAGCGCTGAAGCTATACAAATCTGCAGTAAAGCCATAATGGAGTATGTGGCTCACCAGAGCATTACACCAAGGAAGCTCAGAAAACTTAGACACATCGCTGAgaggaaaatacaacaaaacggACAGAATATGGGGAATAAATCTCTTCTGGAATTGTTTCAGGCCATTGCAGCTAATGAGTACAATGATAAGAAGACTGTTGACCTGATCTTTTCCATGTTGCAGAAAGCAAACTTGACTCACCTGCAAAAGAAAGTTATGAGATTGTTCATAGCTAGATAGATTTCAATAAGATCAGAATCCAATCCTCCCACAGTATTAGTATTCCTCCActtagtattttacagtattccGCAATACATTTATAGTACATCTCATTTTCTCAAACTTAAATGAACTGCAGGAGTCTGCCTTTGCTCAGGAATGACATTTCAGAAGGTTACatcatttcatttgaattcattgtgtttatatgtttggatttaaattatttaaagaaaaaatgatttattatggTCTACAAAGCTAGGATATTCTAAACACCATAAGCTAATGTTATTAATGACtgccatttttttccccttcaaatGTCGAAGATACTGGCAATCCACAAGAAAACTGTAGTTTTAatccaataaaatgttttttattaaactttgtCATAGGCCAATTATATTGTATCATGCATTTTCAGagaatttcaatgtttttatttttcatagacaacattgtaataaaaggtatttttgGATAACAAACTCTTTTGATTGGTCGGTTTTCAGACATTTTACTTCCTTTCGTCTCCTCTTTAAGACTTCAGCTCTGAGACATTTCTCTGGCCTGC

Function

GO: NA

KEGG:

id description
K05143 TNFRSF6B, DCR3; tumor necrosis factor receptor superfamily member 6B

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008339 True 1476 mRNA 0.45 4 53300476 53303340

Neighbor

gene id symbol gene type direction distance location
AMCG00008340 NA coding downstream 18905 53276379 ~ 53281571 (-)
AMCG00008332 NA coding downstream 650914 52626515 ~ 52649562 (-)
AMCG00008331 NA coding downstream 716451 52572120 ~ 52584025 (-)
AMCG00008329 cbfa2t2 coding downstream 795154 52493341 ~ 52505322 (-)
AMCG00008324 LOC106566898 coding downstream 874805 52388795 ~ 52425671 (-)
AMCG00008341 NA coding upstream 2458 53305798 ~ 53357218 (-)
G30417 NA non-coding downstream 152303 53145185 ~ 53148173 (-)
G30409 NA non-coding downstream 217574 53079584 ~ 53082902 (-)
G30276 NA non-coding downstream 974085 52326161 ~ 52326391 (-)
G30275 NA non-coding downstream 974439 52325705 ~ 52326037 (-)
G30270 NA non-coding downstream 1011353 52288890 ~ 52289123 (-)
G30479 NA non-coding upstream 108654 53411994 ~ 53416431 (-)
G30486 NA non-coding upstream 127612 53430952 ~ 53434101 (-)
G30505 NA non-coding upstream 183501 53486841 ~ 53491107 (-)
G30501 NA non-coding upstream 196399 53499739 ~ 53506725 (-)
AMCG00008325 znf341,LOC106566899 other downstream 915909 52381056 ~ 52384567 (-)
AMCG00008318 NA other downstream 961379 52329236 ~ 52339097 (-)
AMCG00008298 NA other downstream 2772440 50523987 ~ 50528036 (-)
G30054 NA other downstream 3026293 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 3246374 50053825 ~ 50054102 (-)

Expression


Co-expression Network