AMCG00008341


Basic Information

Item Value
gene id AMCG00008341
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 53305798 ~ 53357218 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00008341
ATGCCTAAAATCACCCTGAAAGGATTAACCGTGGACTTTCCCTTCACTCCATATAAATGTCAGGAAGATTATATGAACAAGGTCATTGAATGTCTGCAAAATaGAGTAAATGGGGTTCTGGAGAGTCCAACTGGCACAGGGAAGActctgtgtctgctgtgtgcCTCACTGGCCTGGAGAGATCACTTTAAAGACACTATTTCAGCCAGGAAGATAGCAGAAAAGATGGGTGGTGCAGAACTGTTTCCTGATAGGCCCCTACcgaaagtgtgtgtgttaggaTCCAGAGAGCAGCTGTGCATCAACCCTGAAGTCATGAGACAAGAGAGTAACCACATTAAGGTACACATGTGCAGAGCAAAGATGACCTCACGCTCGTGTTTATATTACAACAATGTTGAAGAAAAGAGCACAGAAAAGGAGCTTGTGAACACTATTTTGGATGTGGAAGATTTAGTGAAAGGTGGCACCAAGCACAGggTTTGCCCATATTATTTGTCTCGGACACTAAAGCAGCAAGCGGACATCATATTTATGCCCTATAACTATCTTCTTGATCCAAAGAGTCGGAGAGCTCACAATATTGAACTGAAGGGTGCCGTGGTCATTTTTGATGAAGCACACAATGTGgagaAGATGTGCGAAGAGTCTACCTCCTTTGACCTGAGCCCTTATGATTTGGCCACAGGAATTGAAGCTGTGAATAAGGTCCTAGTGGAGCAAGCCGGCCAGGCCAGCTCCAGTAATGTCAGTGAGGACTTCAGCATGGACATCCTCAATTCAGGTTTAAAAATGGATATTGCCATTGTTGCGAAAATCAAAAGAATTCTCCTTGATCTTGAAGCTGCTATTGACTCTTTTGAACTTCCTATGAATGGACAGGGCATAACCAAACCAGGAAGCTATATCTACGAGCTATTCAAGCAAGTGCAACTTACATTCGACACAAAATCATCCATTTTGGAAGCACTGGAACAGATAACTGGATATTTAGCTGGGCGAGCTGGCAtttttacaaacacaacagGACTACAGAAGCTTGCAGACATTATCCAGttttgtttttattctgtttcaCTGTTTAAGTGTCTGTTCTCCACAGGAACTACACATGTTGTGCATATCCATCGAGATACCAGctttcagaaaaagaaacagaccaCTGATATTTGGTCATCATCTTCCTCTAAAAAACAagGGAATGTCCTGAGTTACTGGTGCTTCTCCCCAGGATTCAGTATGCAGGAACTGGTGCGGCAGGGGGTCCGCTCCATCATCCTCACCAGCGGcaccctctcccctctctcttccttcaCCTCCGAGATGCAAATACCCTTTCCAGTTTCCCTGGAAAACCCTCATGTGATTGAGAAACATCAAATTTTTGTTGGCATTGTCCCAAAGGGGCCGGACAGTGTTCAGCTGAGTTCAGCCTTTGACAGAAGgtttttacCCGATTACATGGCATCTTTGGGAAATACTGTTGTAAACCTTGGGCGCATAGTTCCTCATGGCCtattggttttctttccatCATATCCTGTCATGGATAAGACCATTGAATACTGGAgggAGAAGGGACACAGTAATCGGATAGAAGATATCAAACCAATGTTTGTAGAACCCAAGGGCAAAGGAACGTTCAATGAGGTGATTGATGGCTATTATAACAAAGTGATTGATCCGAAACTGAATGGAGCCAGCTTCTTTGCTGTATGCCGAGGAAAGGCCAGCGAAGGACTGGATTTTGCAGACGCTAACGGCAGAGGAGTCATCATCACAGGCCTTCCTTTCCCCCCTAGAATGGATCCCCGGGTCATcttaaaaatgcagtttcttgAAGAAATGCGAAGGAAGGCATCTGGTGGTGTAAAGtATCTGTCAGGACAGGAGTGGTACAGGCAGCAGGCATCCCGTGCCGTCAATCAAGCCATCGGCAGAGTCATCAGGCATCGGGAAGACTTTGGTGCTATATTTCTGTGTGACCACAGGTTCATGGGCACAGACGCTCGCTCCCAGTTACCCTCTTGGGTTCGCCCCTATGTTCGAGTGTATGACAACTTTGGACACATGATCCGAGACGTGGCGCAGTTTTTCAGGGTTGCCCAGAAAATTATGCCGCCTCCAAAAACAAAGGCGTCTACTTCTAAACGTGAGGCCGTATGTTCATCTGAAGGAGCTTCCATTGGCTGTGCTTCCTCGGCTTCATTTCTGTCAAGCCACGAACATTTTGTGCAGAAGGCCAAGGCACTAGATGCCCATGTCCCCAGTCTTAAAAAGAGACGGCTCAATGACCAATCGCCAGGGGATGGCATTGCTAGGATTTGCATCGAATACGAGACACAAATGCAGTCAAGCCGGAGAAGGACAGCTGGTCTGTTAGATGCTCTGGAGCacaatgagagaaagagaggggatgAAGAGGAAGCACTTGTGGGAGAAGAAAAGGCTAGTCGCTTATCAACGTTGTCTCTTCAACATGACAAACGTATGGAGGACGAGCAAAGGGGAGGAAAGCGGAAAATTAAATTGGTCCAAGATCGGAAACAAAGTGGCTCTCCAAATGTGTCCGAACAAACCAAAGCAGATAAGGCCAAGGTGTTCATGGTGGCAGTGCGGCAGGCCCTGAGCCAGGTGAATTACGAACGCTTCACCCAAGCCATGCAGCAGTACAAGAGGACGGATGACCTGGAGGCTGCAGTGGCCGAGCTGGCTGGACTCTTTATCGGGGATTCTAACAAGCATAGTCTACTGAGAGATTTTTATCAGTTTGTCCGTCCTCACCATAAGAAAAGGTTTGATGAGGTTTGCCTGGAACTGACAGGCGATGGTTGTGGGTACAAACCTGAGCACTCTCTGTCTAAGGAGGAAAGGGAAAAATTAATTCTGCAAACAGAAGCTGCggcagagaaaaaacagaaagatgAGATACCAGCCCTGTCCACCCAAACTGCATTCTCAAAGGAGCAGCTGAACACAAGTCTGCAGATGAACAAGGGGGGCTCTCATCTCAGCACTGACAGTCTTACCAAGGATTCCGCTTTGCCCCTTCAGACTGGTCCTAAAGGCAAACCCCAGAATCTGCCCACACAGAAAAGTCAGCTTCTTTCCTCCTATCTCAGcgatgtgaaaaaaaacatcgGCCTCACCAAGTACAACCAGTTTTATGTGGCAATGCAGGACTACAAAAGAACGGACGGTTATGACAACATGGTTACTACAGTGGTGAGCCTCTTCACCGAAAAAACCGAGGACCTCCGCCTTCTCCGGAtgttctCCATGTTTGTCCGTCCGCACCACAAGCCACAGTTCTCTCAGATGTTTAAAGAGTTGATGGGAGATGCTGACAAGTCCTCAGCAGATGAGGATCTGAAGGTCGAGCAGCAACCTCAGGCTGCAATAAGCCATAATCCT

Function

GO:

id name namespace
GO:0003676 nucleic acid binding molecular_function
GO:0000166 nucleotide binding molecular_function

KEGG:

id description
K11136 RTEL1; regulator of telomere elongation helicase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00008341 True 3414 mRNA 0.47 31 53305798 53357218

Neighbor

gene id symbol gene type direction distance location
AMCG00008339 NA coding downstream 2458 53300476 ~ 53303340 (-)
AMCG00008340 NA coding downstream 24227 53276379 ~ 53281571 (-)
AMCG00008332 NA coding downstream 656236 52626515 ~ 52649562 (-)
AMCG00008331 NA coding downstream 721773 52572120 ~ 52584025 (-)
AMCG00008329 cbfa2t2 coding downstream 800476 52493341 ~ 52505322 (-)
G30417 NA non-coding downstream 157625 53145185 ~ 53148173 (-)
G30409 NA non-coding downstream 222896 53079584 ~ 53082902 (-)
G30276 NA non-coding downstream 979407 52326161 ~ 52326391 (-)
G30275 NA non-coding downstream 979761 52325705 ~ 52326037 (-)
G30270 NA non-coding downstream 1016675 52288890 ~ 52289123 (-)
G30479 NA non-coding upstream 54776 53411994 ~ 53416431 (-)
G30486 NA non-coding upstream 73734 53430952 ~ 53434101 (-)
G30505 NA non-coding upstream 129623 53486841 ~ 53491107 (-)
G30501 NA non-coding upstream 142521 53499739 ~ 53506725 (-)
AMCG00008325 znf341,LOC106566899 other downstream 921231 52381056 ~ 52384567 (-)
AMCG00008318 NA other downstream 966701 52329236 ~ 52339097 (-)
AMCG00008298 NA other downstream 2777762 50523987 ~ 50528036 (-)
G30054 NA other downstream 3031615 50273738 ~ 50274183 (-)
G29974 LOC101154678 other downstream 3251696 50053825 ~ 50054102 (-)

Expression


Co-expression Network