G20395



Basic Information


Item Value
gene id G20395
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 259091 ~ 259480 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU25385
ggggatcaaatacttttttcccctcactgtagatataATGTTTCAGATCATAAtacatcatctctctctctctctctctccctcagtgagGATGCGATGGAGTATTCAAAGGAATTTGTTACATCAGTGGTTCTGGGGAAGGACCTCGTACCCAGGATCGGTCTCTCTCAGCTCGAGGGGTTCCGGCGCCACCTGCTGGAGGTCCTGCAGAAGAGCAACAAGCCCAAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU25385 True 228 lncRNA 0.50 2 259091 259480

Neighbor


gene id symbol gene type direction distance location
AMCG00006987 ddb1 coding downstream 17631 226095 ~ 241460 (-)
AMCG00006988 NA coding downstream 60262 195304 ~ 198829 (-)
AMCG00006978 NA coding downstream 115910 140536 ~ 143181 (-)
AMCG00006981 NA coding downstream 121358 127488 ~ 137733 (-)
AMCG00006977 NA coding downstream 133928 113177 ~ 125163 (-)
AMCG00006995 NA coding upstream 58136 317616 ~ 328711 (-)
AMCG00006996 NA coding upstream 106510 365990 ~ 379890 (-)
AMCG00007002 NA coding upstream 205089 464569 ~ 472311 (-)
AMCG00007003 NA coding upstream 214378 473858 ~ 478272 (-)
AMCG00007004 NA coding upstream 229175 488655 ~ 509749 (-)
G20355 NA non-coding downstream 70233 183757 ~ 188858 (-)
G20353 NA non-coding downstream 76268 167934 ~ 182823 (-)
G20412 NA non-coding upstream 45109 304589 ~ 306860 (-)
G20424 NA non-coding upstream 48529 308009 ~ 309826 (-)
G20423 NA non-coding upstream 51233 310713 ~ 317114 (-)
G20446 LOC103368535,LOC104922780 non-coding upstream 86794 346274 ~ 353471 (-)
G20465 NA non-coding upstream 163854 423334 ~ 424778 (-)
G20388 ddb1,LOC107681355 other downstream 26597 230324 ~ 232494 (-)
G20397 LOC100846954 other upstream 103 259583 ~ 260236 (-)
AMCG00006997 NA other upstream 97138 356618 ~ 362294 (-)
AMCG00007001 NA other upstream 149359 408839 ~ 414126 (-)
G20609 NA other upstream 586449 845929 ~ 917829 (-)
G20630 NA other upstream 692756 952236 ~ 953062 (-)

Expression



Co-expression Network