G20424


Basic Information

Item Value
gene id G20424
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 308009 ~ 309826 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU25427
TCAgagaataataaaactgtattaaacaCAAGAAagtcagcagagagagagagaagagcagatactgggaaggaaaggaaaacaaggggatgagagggagagattaaTAGAGTATAGAGAACGtgtgatggagggagggagagggggggcaaGCAGTCTGTACATGCAGAACGTCAGTGTTGACAGGGCACTTTGTGAAGTTTGGCTCTGATACAGAATTAGGAAtcggagacagacagactgataaGAGTCGAATGCATCACTGTCCTACAGGCAggcggacacacacacagcagtgattATTAGAGAGAACAATGTCAtgtcaataacaataatatcaaCAAGAGTATTtataacaacagtaataataaaataacaaaggaGTGATTGTTGTGAAGATTAAGCCAGTGTAAATTAGTACCTCGAGGTTAATTAGAGACTAGATTGGTGACAGTGAATCAGCTCATATTTACAGCCTGCAGCCGCCCGTGAGCTTTCAGTGAAATCTGTCCtggttttttaattattcattatctTTCAGGTGTTAATTTGCTTAattctgtattatttcattttcattatctgAGTTTAATCTCATTTTATTCTTGACTCATGAGTGTTTGTTAAACAaggttttgaaaaaaacaacaacagtaactTTGCAGGTCTGAGTTTGTGTGTCGTGTTGTACAGATCTGTCGCTGAGGGAGTTGTGTTCtatgtctctcaggaccagggctgggccCGGCTGCACGCTGCTGAGGGTACAGAGAGTCCGTGTGGAGCTCAGGAGACACTAGACTGAGTTATATCCAGTCAGTTGGGAAATTAGATTCACTTGAACTCGTTTTTGGACAAAGACAGTTTAAGGCACTTtaatcagacagacagacagttctACTAGAAGGAGCTCAGTGTAGGGATAGGGTTcccctcactcacactctcacacacaaagtCCTGTCTCAGTCATCGTGGTTACACAGACCTgtacaaacacagcacacacagctcCACAACTTCCTGTAAAAATCAGTAAAGCGCACGTATTtcagggagggatggagggatggagggagttTGGGAGGAAGGTCAGTGTGTGATCTATACCTCCAGTCCAGTGATTGAGCTACACTTCCAATTCAAAccagttcagtccagtcctTTCCACTCCAGTCCAGTGTGTGAGCTACTCTTCCAGTTCCAAAGTGTTTAGTCTGGACAGAAACAACCCAGACGAGTCCAGTCCAGTAAAGTCCAGTGTATGAGCTACAGTTCCAGTtcaatccagtccagtccagtgtgtgGTTCAAAATCcagggcagagagagagtgagtgagggcTCTGAGCAACACGCCTTACAACAACAGCACCGCACACATGACACTGCGTCGCACAGCAGGCCGTGCGGGGCTCTGAGCCTGTGGTGTCCACACACTGCCAGGCAGCACTCAGGAGATCCGCTCGGCAAGGCGATCCACCAACCCAGAGATCCAGAGATGGGATGACGCGGTGACGGGTCCTCACTGCTCCAGTCCGAGTCCAGTCATACAGTAACAGTGTTTAGAGCGCTAAGGCGCAGTTGTGTCTCTGACTGTGCTagtgtcagggtgtcagtgaTGTACACATCACTCACACTGTGGGGAGCTACAGCATGGGGAggtggtcagtgtgtgtgacacaGTGTCTTAGTGTTTGTTACAGTGTATatgtcacagtgtgtgttacagtgtgtacGTGTGgtacagtgtcacagtgtgcttgttacagtgtacactcacctaaaggattattaggaacacctgttcaatttctca

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU25427 True 1818 lncRNA 0.46 1 308009 309826

Neighbor

gene id symbol gene type direction distance location
AMCG00006987 ddb1 coding downstream 66549 226095 ~ 241460 (-)
AMCG00006988 NA coding downstream 109180 195304 ~ 198829 (-)
AMCG00006978 NA coding downstream 164828 140536 ~ 143181 (-)
AMCG00006981 NA coding downstream 170276 127488 ~ 137733 (-)
AMCG00006977 NA coding downstream 182846 113177 ~ 125163 (-)
AMCG00006995 NA coding upstream 7790 317616 ~ 328711 (-)
AMCG00006996 NA coding upstream 56164 365990 ~ 379890 (-)
AMCG00007002 NA coding upstream 154743 464569 ~ 472311 (-)
AMCG00007003 NA coding upstream 164032 473858 ~ 478272 (-)
AMCG00007004 NA coding upstream 178829 488655 ~ 509749 (-)
G20412 NA non-coding downstream 1149 304589 ~ 306860 (-)
G20395 NA non-coding downstream 48529 259091 ~ 259480 (-)
G20355 NA non-coding downstream 119151 183757 ~ 188858 (-)
G20353 NA non-coding downstream 125186 167934 ~ 182823 (-)
G20423 NA non-coding upstream 887 310713 ~ 317114 (-)
G20446 LOC103368535,LOC104922780 non-coding upstream 36448 346274 ~ 353471 (-)
G20465 NA non-coding upstream 113508 423334 ~ 424778 (-)
G20501 NA non-coding upstream 236230 546056 ~ 546501 (-)
G20507 NA non-coding upstream 278499 588325 ~ 588602 (-)
G20397 LOC100846954 other downstream 47773 259583 ~ 260236 (-)
G20388 ddb1,LOC107681355 other downstream 75515 230324 ~ 232494 (-)
AMCG00006997 NA other upstream 46792 356618 ~ 362294 (-)
AMCG00007001 NA other upstream 99013 408839 ~ 414126 (-)
G20609 NA other upstream 536103 845929 ~ 917829 (-)
G20630 NA other upstream 642410 952236 ~ 953062 (-)
AMCG00007059 NA other upstream 1832849 2142675 ~ 2196855 (-)

Expression


Co-expression Network