G20676


Basic Information

Item Value
gene id G20676
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 990555 ~ 991999 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU25778
TGTTATTTTGCCTCCCGCTGCCTTATGCTAATCTCTAACACTGTTAGAAATTATGCAGACACAAGAAATTTAAAAGTAACTGTTGCTAAAGGCATTCATAAGCAGTGTGAAGAGGATTGATTTTTAtcttttgcaaattaaattatactttcGTCTTTGGTAATTCTATTTTTAAGCACGTCATGTTCCAGGTAATTACAACAGGTAATAAATTACTCCAGCCTGAAACAGCTTGTGTTTATTATGTAAGATAAGGCCATGACATCCTAGCCAGAGGCAGCACTGAAATGAAATCAGTTTAATCAGTGAGGTCTATGGATTATCTTTTCAACATTAGACCTTGCTTGACActctgtaaaacatgtttttttctaaagacttttcatttcttttcagTTGGAACAGATTCCCTATAGAGCTGTTTGGGCTGTAAAAAAATCCATCATGCTTTCTTCAGTGCAAagatgcaaaaaaaatgtaaaccgtTTTCAGAATCTTTGTGCTGGAACTCAGGAGTTCACGAAAATTACTATTGTGTGTTCACATTCAGGTAAATGAGGAAAGGACAATTTCTCACTGTGGCTCACAGTGACTGGATCAGATTTCACTCCCACATCATTCTTGTCAACATAGGAGCTGAAGTAGTTGTGAGATGttacacaatgtaaaatatatatttttatgtcaaTAACATAAGTGTGttatgtacatattgtaaagtgtggATTACTTCCTAACTAACCAAATAACGTTGTAGCAACATTGCATTGAAGTGAACACAGAACAATCCAGTGTGGTGGCAATGTGAATTGAATGTtatcaaaacattgtaaaataaagagaga

Function

GO:

id name namespace
GO:0043603 cellular amide metabolic process biological_process
GO:0043604 amide biosynthetic process biological_process
GO:0043043 peptide biosynthetic process biological_process
GO:0006412 translation biological_process
GO:0006518 peptide metabolic process biological_process

KEGG:

id description
ko03010 Ribosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU25778 True 845 lncRNA 0.35 2 990555 991999

Neighbor

gene id symbol gene type direction distance location
AMCG00007030 LOC103364536,LOC102291832,LOC101472382,LOC102208148 coding downstream 16761 965506 ~ 973794 (-)
AMCG00007031 NA coding downstream 90067 898264 ~ 900488 (-)
AMCG00007015 NA coding downstream 265594 724461 ~ 724961 (-)
AMCG00007006 NA coding downstream 319690 669164 ~ 670865 (-)
AMCG00007011 NA coding downstream 331642 654866 ~ 658913 (-)
AMCG00007032 galnt18,galnt18b,LOC106587200 coding upstream 102746 1094745 ~ 1113487 (-)
AMCG00007036 NA coding upstream 194642 1186641 ~ 1208036 (-)
AMCG00007035 arntl,arntl1a,LOC108439331,LOC105895625 coding upstream 273592 1265591 ~ 1285027 (-)
AMCG00007037 NA coding upstream 385965 1377964 ~ 1383579 (-)
AMCG00007041 tead1,LOC105016886 coding upstream 402357 1394356 ~ 1411242 (-)
G20614 NA non-coding downstream 54053 906596 ~ 936502 (-)
G20617 NA non-coding downstream 70448 914130 ~ 920107 (-)
G20612 NA non-coding downstream 86820 902919 ~ 903735 (-)
G20607 NA non-coding downstream 161031 829097 ~ 829524 (-)
G20604 NA non-coding downstream 166791 818975 ~ 823764 (-)
G20726 NA non-coding upstream 386457 1378456 ~ 1381110 (-)
G20795 NA non-coding upstream 684305 1676304 ~ 1730479 (-)
G20802 NA non-coding upstream 730557 1722556 ~ 1727167 (-)
G20870 NA non-coding upstream 1179905 2171904 ~ 2172483 (-)
G20908 NA non-coding upstream 1208054 2200053 ~ 2308118 (-)
G20630 NA other downstream 37493 952236 ~ 953062 (-)
G20609 NA other downstream 72726 845929 ~ 917829 (-)
AMCG00007001 NA other downstream 576429 408839 ~ 414126 (-)
AMCG00006997 NA other downstream 628261 356618 ~ 362294 (-)
G20397 LOC100846954 other downstream 730319 259583 ~ 260236 (-)
AMCG00007059 NA other upstream 1150676 2142675 ~ 2196855 (-)
AMCG00007072 NA other upstream 1652906 2644905 ~ 2663649 (-)
AMCG00007091 ckap5,LOC108269026 other upstream 2484069 3476068 ~ 3500670 (-)
G21426 NA other upstream 4049660 5041659 ~ 5049520 (-)
G21429 NA other upstream 4064788 5056787 ~ 5057406 (-)

Expression


Co-expression Network