Gene
RNA
| Item | Value |
|---|---|
| gene id | G21419 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 4963357 ~ 4963560 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| description |
|---|
| PREDICTED: structural maintenance of chromosomes protein 4 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU26771 | True | 204 | lncRNA | 0.65 | 1 | 4963357 | 4963560 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007129 | NA | coding | downstream | 4687 | 4948505 ~ 4958670 (-) |
| AMCG00007131 | NA | coding | downstream | 31735 | 4925129 ~ 4931622 (-) |
| AMCG00007133 | NA | coding | downstream | 42747 | 4918537 ~ 4920610 (-) |
| AMCG00007132 | pacsin3,LOC106587102 | coding | downstream | 44864 | 4895642 ~ 4918493 (-) |
| AMCG00007130 | NA | coding | downstream | 70061 | 4884584 ~ 4893296 (-) |
| AMCG00007137 | NA | coding | upstream | 149702 | 5113262 ~ 5121365 (-) |
| AMCG00007136 | dgkz,LOC106561949 | coding | upstream | 185643 | 5149203 ~ 5151982 (-) |
| AMCG00007138 | dgkz,LOC106561949,LOC106587110 | coding | upstream | 203335 | 5166895 ~ 5209036 (-) |
| AMCG00007140 | NA | coding | upstream | 338491 | 5302051 ~ 5304131 (-) |
| AMCG00007139 | creb3l1 | coding | upstream | 344855 | 5308415 ~ 5319239 (-) |
| G21418 | NA | non-coding | downstream | 3604 | 4959516 ~ 4959753 (-) |
| G21414 | NA | non-coding | downstream | 17637 | 4942071 ~ 4945720 (-) |
| G21367 | dhcr7 | non-coding | downstream | 252431 | 4681049 ~ 4710926 (-) |
| G21286 | NA | non-coding | downstream | 590232 | 4357713 ~ 4373125 (-) |
| G21249 | NA | non-coding | downstream | 683788 | 4279316 ~ 4279569 (-) |
| G21423 | NA | non-coding | upstream | 63642 | 5027202 ~ 5027726 (-) |
| G21462 | NA | non-coding | upstream | 168768 | 5132328 ~ 5132542 (-) |
| G21522 | NA | non-coding | upstream | 531789 | 5495349 ~ 5495735 (-) |
| G21535 | NA | non-coding | upstream | 551426 | 5514986 ~ 5515971 (-) |
| G21537 | prdm11,LOC106560765 | non-coding | upstream | 553667 | 5517227 ~ 5518751 (-) |
| AMCG00007091 | ckap5,LOC108269026 | other | downstream | 1462687 | 3476068 ~ 3500670 (-) |
| AMCG00007072 | NA | other | downstream | 2299708 | 2644905 ~ 2663649 (-) |
| AMCG00007059 | NA | other | downstream | 2766502 | 2142675 ~ 2196855 (-) |
| G20630 | NA | other | downstream | 4010295 | 952236 ~ 953062 (-) |
| G20609 | NA | other | downstream | 4045528 | 845929 ~ 917829 (-) |
| G21426 | NA | other | upstream | 78099 | 5041659 ~ 5049520 (-) |
| G21429 | NA | other | upstream | 93227 | 5056787 ~ 5057406 (-) |
| G21632 | psmc3,prs6a,LOC107758446 | other | upstream | 853249 | 5816809 ~ 5820284 (-) |
| AMCG00007173 | madd | other | upstream | 1044080 | 6007640 ~ 6054064 (-) |
| AMCG00007201 | NA | other | upstream | 2360864 | 7324424 ~ 7342341 (-) |
