G21756


Basic Information

Item Value
gene id G21756
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 6566217 ~ 6569739 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU27263
TGTGTTgggataatttattttgtgtagttcattcaaataaacactattttgattctctatttttttccctctttacACCCACAGCTATGTTATACAAAAACgacaaacaaaaagaacaaacggaaggaaaaacaaaacaatcacacGATGTCCTTAAATAACACAGAATCTAAACTAACAGTTTATTAAACGTTAAGAGTTTGGTCTCGTTACTCGAAAGAAGCACAATGCCGTCAAAAAGAGTACAAATCATGTGAAAATCATCTATGAAACCATTTATCAAAAAACAGAGAATATCAAAAGTGTGACGTTGTGCTACAAAAATATTGTGCCACGGACCCCCGGACCTGAGGGGAGCCCACAGGGGATTAGAGAACCGCCGCCCCACTTTTCGGACATGATGTTACACAGCCGTGACTCCGACGCCCCAGACCTCAGTGTGTTCCCGTCGGCGCCCTGGGCCCGGTCCCGCTGCCGGGGTGTAGCGTGTTTACTGCGGGTGTGTTGGGGGGCTCTAGTGTTGTAAACTCAGTCGGACCGGCACTGTGCAGTGATGGCAGCTTCAGCGTGTTGCTCCCCGATTCGACTGCAGGAAGTGCGAGTTGAGTGGGACTGAGCGTGCACAAGTACGGCCTGAAAGACCCtgaattgaatccttaattgaaccttcaattttattaaatttcCTAAATCGGAgccttttaaatgattttaaacagtagggagtttaagttaagtatataaagaaccaactctttttccacaatataaaaagtcaaatctaatcTAAGCAGCTGGAACAagaaccagcagggtaggggctcctccaggactcgagtttgggaacccctggtttaGGGCAGACTGGGGCAAAAGCAATCCGTCTCTCCAATGCCATTTCACTTGCTTTCCCACttgcagatgaaaaaaataataaatcaacgTCTGCCCCATTGCAGGGCCTTCAGAACTGCTCCAAGAGCACGGTCAGCAGCAAACCACCGTCGCGAGAGGAGCACCACAGCTGCTCGGCTGTAAAGTCTGTAACTCAAACGTCCTAGCAATTAAGAGACCAACTGACCCAGATCTGAGGACTGCCGTTCTCCACGGGACAAACGAAGCCAGCAAACGGATCCGAGTCCGGGTGCAGACGGGCTCTCGGGAGACGCACACTGCGGACGCGGACGCAGGATTTTCAGAAGATGTCcggtataaatgtatataaaaaggtACATCCGTCCAGAGTGACGCAACACAAACTGCTATTTGAGCTTTCCTAGCGAACAAAAACCCAAATACACTGGGAGCGAAGCCCCGAGGGCGTGAACGCAAATGGCTGTTTCCCAAGTAAATTATTCAGAACAAGTGCTGCAATTCTGCAAGTTAAACCACTGCGTTAGTGCCGAGGAGAAGCCCAGCGAAGACCAGAACCGTTCCCTAAAGAGACGGCGGTTGGCGTTGGTGTCGAGACGCTTCTCCAGGTAGATAAGGTTTCAGTTCTCGATGCCAGCGTTCCCCTCAAATCGAGATGTTCACACAAAGCACAAATTAAGTGCCACTAAGTCACCCTGTTCGTTTCAGAACTTTAAAACCCGATCCACCCACCGGAGACTGGTCAGACCTGGCTCGAGCTGGATCCTAGCAACCTGGATTCGTCAAACCGTCCATCTCTGAGCTGCACAACAATTCAGAGTTAAAGCCGGGCGCGAGCTCAGACAGCGCTCCGATAGAGACGCGGTGCTTTGCAACGGCTCCGTTAAATCGCTGGCTTTTTACCACTGAAGTCAACAGCTTTCTacaccaggggttttcaaaccggtctaCGCCAATCTGCTCAACAAAGACAGCCCCCGAGCATCTCTCAGCGCTTCACCATTTGTACCCTGTCACTGAGTGGCAGATCAAGGTACACAATTAAAAGAAGTTAAAAATCACAGTAGGATTGAACAGACCACGCCCCAAAGAGCTACAGGGACGAAAGCCAAGGGCAGAGGAATGGCGTGAGATGCAAAGCGTATCCAGGAGGGTAACCCTGCTCAGGCTGTCACAGAGAAGTGAGCGCCAACCGATCGAttagagaacaaaaaaaaaaaaaaatctcaaattaaaagTCAGATTCGCGAGAAGTTTCTGCGATTCCTTCCCAGTGAAGGATGTGCATTTGTGATGCAATTTACACCCATTTTTTCGGATCAGAGTTCACGTacagatttcagttttgttttcacacaacCGGCTGTTGGAGCAGACGGACGTCCGCGAGAAGAAGCCTTGTGGCGTTCGCTCTACCAACACGCCTCTTTCAGTGCATCGTAAATCGCACATAAACAGCCCGCTGAgcagacaggacaggacaggtaCAGTGAAGTATAAACAGTGCACGTGTGTGTCTTCAGAAGAGATTAAATAATCAAAGGAAGGCTGACTGCGCACCAGAAAGCCCACGGCTAAAAACATCGACAggaaattcatttaaaaatgcgATTAACATTCACTGTGATCCCGGTTACTCACCGCCTCGACCCCGAAACTATTTACAAGTGTTTGCGTTTCATTTTACAATCTTAAAGGTCAGAGACCCTCTGGGATCAGCTCAACCTTTAACCACTCTACGGCCATCTGTCCTCCCCTCCTGCCCTGAACATGCGGGCGTATCCGGCAGAAACGGACATCCCCCATCAGAGTCCCCGGGAGCACAGAGAGCCGAGGACAGACAGTCCCGTTATACATCCGTAATGCTTCACATACATCGTTACTGAGGACTATTTTACAAAGGGCTGTTTCGTTTAGTTTCTGTTGGAGAAACAGAGAAGTTTGCACAATTTCACCAAGAGATTATACAAGTGAGAGGAGAtgggaaggaagagagagagacacagagagagcgTTTTGCACAGAAAGTTTGGCATGGTGCTAATgatgaactttttttttgtttatagtttGTAAGGTTTCATCATCACTTCCCTGGATGGAGAGACCCACCAGCTCACTCCCTCAACCTCTCCAATCTGAAGAGGAAGAATGAGCTTCTTGGATTACTCCCCACCCGGCCCACTCACACAAGCACCACTAGCGCTGTGCCAAAGCGTTAGATCAGCCAGGTccacagaaagagaaaaggagaggaagaggatgaAGAGAAATAAGACGGACAGAAAAcctccccccccgccccgctGCGCTACTGCGGGAAGCTGTTCTGCTGCCGGCGTTTGGCGGATCTCATCTTCTCGAAGCGGGACTCCATCTCCTCCAGGACCTTGGGCGTGTAGCGCACCACCAGCTTCACCGTGCCCTGCGCCGCCTTCAGCAGCTCCACCGCCTTCTCGTGGTGCTCGCCCTCC
>TU27264
TGTGTTgggataatttattttgtgtagttcattcaaataaacactattttgattctctatttttttccctctttacACCCACAGCTATGTTATACAAAAACgacaaacaaaaagaacaaacggaaggaaaaacaaaacaatcacacGATGTCCTTAAATAACACAGAATCTAAACTAACAGTTTATTAAACGTTAAGAGTTTGGTCTCGTTACTCGAAAGAAGCACAATGCCGTCAAAAAGAGTACAAATCATGTGAAAATCATCTATGAAACCATTTATCAAAAAACAGAGAATATCAAAAGTGTGACGTTGTGCTACAAAAATATTGTGCCACGGACCCCCGGACCTGAGGGGAGCCCACAGGGGATTAGAGAACCGCCGCCCCACTTTTCGGACATGATGTTACACAGCCGTGACTCCGACGCCCCAGACCTCAGTGTGTTCCCGTCGGCGCCCTGGGCCCGGTCCCGCTGCCGGGGTGTAGCGTGTTTACTGCGGGTGTGTTGGGGGGCTCTAGTGTTGTAAACTCAGTCGGACCGGCACTGTGCAGTGATGGCAGCTTCAGCGTGTTGCTCCCCGATTCGACTGCAGGAAGTGCGAGTTGAGTGGGACTGAGCGTGCACAAGTACGGCCTGAAAGACCCtgaattgaatccttaattgaaccttcaattttattaaatttcCTAAATCGGAgccttttaaatgattttaaacagtagggagtttaagttaagtatataaagaaccaactctttttccacaatataaaaagtcaaatctaatcTAAGCAGCTGGAACAagaaccagcagggtaggggctcctccaggactcgagtttgggaacccctggtttaGGGCAGACTGGGGCAAAAGCAATCCGTCTCTCCAATGCCATTTCACTTGCTTTCCCACttgcagatgaaaaaaataataaatcaacgTCTGCCCCATTGCAGGGCCTTCAGAACTGCTCCAAGAGCACGGTCAGCAGCAAACCACCGTCGCGAGAGGAGCACCACAGCTGCTCGGCTGTAAAGTCTGTAACTCAAACGTCCTAGCAATTAAGAGACCAACTGACCCAGATCTGAGGACTGCCGTTCTCCACGGGACAAACGAAGCCAGCAAACGGATCCGAGTCCGGGTGCAGACGGGCTCTCGGGAGACGCACACTGCGGACGCGGACGCAGGATTTTCAGAAGATGTCcggtataaatgtatataaaaaggtACATCCGTCCAGAGTGACGCAACACAAACTGCTATTTGAGCTTTCCTAGCGAACAAAAACCCAAATACACTGGGAGCGAAGCCCCGAGGGCGTGAACGCAAATGGCTGTTTCCCAAGTAAATTATTCAGAACAAGTGCTGCAATTCTGCAAGTTAAACCACTGCGTTAGTGCCGAGGAGAAGCCCAGCGAAGACCAGAACCGTTCCCTAAAGAGACGGCGGTTGGCGTTGGTGTCGAGACGCTTCTCCAGGTAGATAAGGTTTCAGTTCTCGATGCCAGCGTTCCCCTCAAATCGAGATGTTCACACAAAGCACAAATTAAGTGCCACTAAGTCACCCTGTTCGTTTCAGAACTTTAAAACCCGATCCACCCACCGGAGACTGGTCAGACCTGGCTCGAGCTGGATCCTAGCAACCTGGATTCGTCAAACCGTCCATCTCTGAGCTGCACAACAATTCAGAGTTAAAGCCGGGCGCGAGCTCAGACAGCGCTCCGATAGAGACGCGGTGCTTTGCAACGGCTCCGTTAAATCGCTGGCTTTTTACCACTGAAGTCAACAGCTTTCTacaccaggggttttcaaaccggtcaattaaggattcaattaaacaattaaggcctagtttgaaacaaaaatcagcagggcagggggtactccaggaccggcttgaaaaccactgttctaCGCCAATCTGCTCAACAAAGACAGCCCCCGAGCATCTCTCAGCGCTTCACCATTTGTACCCTGTCACTGAGTGGCAGATCAAGGTACACAATTAAAAGAAGTTAAAAATCACAGTAGGATTGAACAGACCACGCCCCAAAGAGCTACAGGGACGAAAGCCAAGGGCAGAGGAATGGCGTGAGATGCAAAGCGTATCCAGGAGGGTAACCCTGCTCAGGCTGTCACAGAGAAGTGAGCGCCAACCGATCGAttagagaacaaaaaaaaaaaaaaatctcaaattaaaagTCAGATTCGCGAGAAGTTTCTGCGATTCCTTCCCAGTGAAGGATGTGCATTTGTGATGCAATTTACACCCATTTTTTCGGATCAGAGTTCACGTacagatttcagttttgttttcacacaacCGGCTGTTGGAGCAGACGGACGTCCGCGAGAAGAAGCCTTGTGGCGTTCGCTCTACCAACACGCCTCTTTCAGTGCATCGTAAATCGCACATAAACAGCCCGCTGAgcagacaggacaggacaggtaCAGTGAAGTATAAACAGTGCACGTGTGTGTCTTCAGAAGAGATTAAATAATCAAAGGAAGGCTGACTGCGCACCAGAAAGCCCACGGCTAAAAACATCGACAggaaattcatttaaaaatgcgATTAACATTCACTGTGATCCCGGTTACTCACCGCCTCGACCCCGAAACTATTTACAAGTGTTTGCGTTTCATTTTACAATCTTAAAGGTCAGAGACCCTCTGGGATCAGCTCAACCTTTAACCACTCTACGGCCATCTGTCCTCCCCTCCTGCCCTGAACATGCGGGCGTATCCGGCAGAAACGGACATCCCCCATCAGAGTCCCCGGGAGCACAGAGAGCCGAGGACAGACAGTCCCGTTATACATCCGTAATGCTTCACATACATCGTTACTGAGGACTATTTTACAAAGGGCTGTTTCGTTTAGTTTCTGTTGGAGAAACAGAGAAGTTTGCACAATTTCACCAAGAGATTATACAAGTGAGAGGAGAtgggaaggaagagagagagacacagagagagcgTTTTGCACAGAAAGTTTGGCATGGTGCTAATgatgaactttttttttgtttatagtttGTAAGGTTTCATCATCACTTCCCTGGATGGAGAGACCCACCAGCTCACTCCCTCAACCTCTCCAATCTGAAGAGGAAGAATGAGCTTCTTGGATTACTCCCCACCCGGCCCACTCACACAAGCACCACTAGCGCTGTGCCAAAGCGTTAGATCAGCCAGGTccacagaaagagaaaaggagaggaagaggatgaAGAGAAATAAGACGGACAGAAAAcctccccccccgccccgctGCGCTACTGCGGGAAGCTGTTCTGCTGCCGGCGTTTGGCGGATCTCATCTTCTCGAAGCGGGACTCCATCTCCTCCAGGACCTTGGGCGTGTAGCGCACCACCAGCTTCACCGTGCCCTGCGCCGCCTTCAGCAGCTCCACCGCCTTCTCGTGGTGCTCGCCCTCC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27263 False 3347 lncRNA 0.49 2 6566217 6569739
TU27264 True 3440 lncRNA 0.48 2 6566217 6569739

Neighbor

gene id symbol gene type direction distance location
AMCG00007177 NA coding downstream 193819 6357010 ~ 6372398 (-)
AMCG00007176 NA coding downstream 443841 6121702 ~ 6122376 (-)
AMCG00007172 nr1h3,LOC107553099,LOC107689968,LOC107664377 coding downstream 478176 6081535 ~ 6088041 (-)
AMCG00007170 NA coding downstream 669632 5872776 ~ 5896585 (-)
AMCG00007168 LOC103364365,LOC108229046,LOC101064922 coding downstream 706950 5858851 ~ 5859267 (-)
AMCG00007185 bbox1,LOC106587091,LOC106561934,LOC107682871 coding upstream 85674 6655413 ~ 6660262 (-)
AMCG00007184 NA coding upstream 105927 6675666 ~ 6676981 (-)
AMCG00007188 fibin,LOC103373419,LOC104955317,LOC107740499,LOC107553104 coding upstream 119841 6689580 ~ 6690200 (-)
AMCG00007189 ano3 coding upstream 171958 6741697 ~ 6756583 (-)
AMCG00007190 NA coding upstream 194485 6764224 ~ 6778550 (-)
G21739 NA non-coding downstream 46481 6519123 ~ 6519736 (-)
G21722 NA non-coding downstream 225046 6340779 ~ 6341171 (-)
G21646 NA non-coding downstream 577895 5915072 ~ 5988322 (-)
G21582 NA non-coding downstream 844675 5721263 ~ 5721542 (-)
G21550 NA non-coding downstream 1004009 5559594 ~ 5562208 (-)
G21786 NA non-coding upstream 65844 6635583 ~ 6638309 (-)
G21787 NA non-coding upstream 69258 6638997 ~ 6644878 (-)
G21803 NA non-coding upstream 117745 6687484 ~ 6689109 (-)
G21807 NA non-coding upstream 134670 6704409 ~ 6704662 (-)
G22057 NA non-coding upstream 1183675 7753414 ~ 7753697 (-)
AMCG00007173 madd other downstream 512153 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 745933 5816809 ~ 5820284 (-)
G21429 NA other downstream 1508811 5056787 ~ 5057406 (-)
G21426 NA other downstream 1516697 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 3065547 3476068 ~ 3500670 (-)
AMCG00007201 NA other upstream 754685 7324424 ~ 7342341 (-)
G21942 NA other upstream 929708 7499447 ~ 7506875 (-)
G22200 NA other upstream 1823457 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 2887749 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 3390323 9960062 ~ 10001165 (-)

Expression


Co-expression Network