Gene
RNA
| Item | Value |
|---|---|
| gene id | G21786 |
| gene name | NA |
| gene type | non-coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030123.1 |
| NCBI id | CM030123.1 |
| chromosome length | 53548854 |
| location | 6635583 ~ 6638309 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU27299 | True | 404 | lncRNA | 0.58 | 3 | 6635583 | 6638309 |
| TU27300 | False | 307 | lncRNA | 0.56 | 2 | 6635583 | 6638059 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00007177 | NA | coding | downstream | 263185 | 6357010 ~ 6372398 (-) |
| AMCG00007176 | NA | coding | downstream | 513207 | 6121702 ~ 6122376 (-) |
| AMCG00007172 | nr1h3,LOC107553099,LOC107689968,LOC107664377 | coding | downstream | 547542 | 6081535 ~ 6088041 (-) |
| AMCG00007170 | NA | coding | downstream | 738998 | 5872776 ~ 5896585 (-) |
| AMCG00007168 | LOC103364365,LOC108229046,LOC101064922 | coding | downstream | 776316 | 5858851 ~ 5859267 (-) |
| AMCG00007185 | bbox1,LOC106587091,LOC106561934,LOC107682871 | coding | upstream | 17104 | 6655413 ~ 6660262 (-) |
| AMCG00007184 | NA | coding | upstream | 37357 | 6675666 ~ 6676981 (-) |
| AMCG00007188 | fibin,LOC103373419,LOC104955317,LOC107740499,LOC107553104 | coding | upstream | 51271 | 6689580 ~ 6690200 (-) |
| AMCG00007189 | ano3 | coding | upstream | 103388 | 6741697 ~ 6756583 (-) |
| AMCG00007190 | NA | coding | upstream | 125915 | 6764224 ~ 6778550 (-) |
| G21756 | NA | non-coding | downstream | 65844 | 6566217 ~ 6569739 (-) |
| G21739 | NA | non-coding | downstream | 115847 | 6519123 ~ 6519736 (-) |
| G21722 | NA | non-coding | downstream | 294412 | 6340779 ~ 6341171 (-) |
| G21646 | NA | non-coding | downstream | 647261 | 5915072 ~ 5988322 (-) |
| G21582 | NA | non-coding | downstream | 914041 | 5721263 ~ 5721542 (-) |
| G21787 | NA | non-coding | upstream | 688 | 6638997 ~ 6644878 (-) |
| G21803 | NA | non-coding | upstream | 49175 | 6687484 ~ 6689109 (-) |
| G21807 | NA | non-coding | upstream | 66100 | 6704409 ~ 6704662 (-) |
| G22057 | NA | non-coding | upstream | 1115105 | 7753414 ~ 7753697 (-) |
| G22077 | NA | non-coding | upstream | 1262493 | 7900802 ~ 7901175 (-) |
| AMCG00007173 | madd | other | downstream | 581519 | 6007640 ~ 6054064 (-) |
| G21632 | psmc3,prs6a,LOC107758446 | other | downstream | 815299 | 5816809 ~ 5820284 (-) |
| G21429 | NA | other | downstream | 1578177 | 5056787 ~ 5057406 (-) |
| G21426 | NA | other | downstream | 1586063 | 5041659 ~ 5049520 (-) |
| AMCG00007091 | ckap5,LOC108269026 | other | downstream | 3134913 | 3476068 ~ 3500670 (-) |
| AMCG00007201 | NA | other | upstream | 686115 | 7324424 ~ 7342341 (-) |
| G21942 | NA | other | upstream | 861138 | 7499447 ~ 7506875 (-) |
| G22200 | NA | other | upstream | 1754887 | 8393196 ~ 8396224 (-) |
| AMCG00007267 | NA | other | upstream | 2819179 | 9457488 ~ 9463337 (-) |
| AMCG00007282 | NA | other | upstream | 3321753 | 9960062 ~ 10001165 (-) |
