G21803



Basic Information


Item Value
gene id G21803
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 6687484 ~ 6689109 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU27322
agacgaagaaaaagaagaaagagcaGGGGGTTGGGGGTCTCATTGCCCTTGCAGTCCAGGTCGCTGGAGTTTCCTCCTGCAGATAATCGTATAGGAGACTTGTGGTCCCATCGgatgtgtctttttaaaacatgacGTAACATTCAGGAAACATATTTATCTTTTTGATTGAAAATCCAAACACGTTGCAACTACAGGATCCGGGAAAAGTACTGATGACTTCGTAGCATGGGAAACAGCAGCGAGagaaaacaattgttttctaCAGAGAAAAAGTCATTTGAGAATGACCTTAACCCCTCAAATAATCAGTTACAACAAACTGTAAAGCTTTGTCAGCTTGGATGATTTTCATCAAGTTTGTTAGAGTATTATTTTCTTGCTCGCGCTTATGTAggaatttttatttaatttattttaaacagatgttgTTGGTTTAAGCCTGGAGAAAAGATTGGCTTGAGTGgtcttgatttttgtttttcatgcaaGTATTACTTTACATTGGAGGTTGGTCGTTGAGGAAACAAAGCctgccaattaattaattaattaattaattaatttaaatattcgCTCACAATAACTTTGCCCATTTAAATTACTTCACTGGAAACTAAAATTAAGCCCTTTAAGCCAACTTGTCTTTAGTCTGCCAAGATCTTATCTGCAACAGATGGTGCTATTATCTTGTAAATGTTTGTCCAACAGTGGGGAGAAAATTCCCGTCTAGAACATCCGAGCCTCAAAACCTCTTGTGTCTTTTGCCTTCTATGAAATATGCGGAATTATCCTCCAGTGCCACTTATTTGCCATTGTGTCGTAATGGGAAGTATTCTGTAAAGATTAGAATTTTGTTTTGAGTGTTTAAACACTCGAGTGTGGTAAACAcgtaatattttataaatgagcttataattgtattaatttaatgctgtgagtgtttatatatttaatgaaccaacaaaaaaaagcacaactgtaatattgtgtaatatgtttttgttttgtattcttgtGGTTACTCTTTGTActgctttgtaaaataataataataataattaataataattataataattgtcaACGGGGATGGTTTTGCAATCCAACAATAAAATTAGTGAACTGCAGGCAGGAAAAGGATCCGAATGCTTAAAAAGTGTAAATCCACCAgaacttttttgtcttttttgtaatAAAGATGTTAATGGTGCCAATTGTTTAATTCCCCTAATTAATGGAAGCGTTGGAGTTTGTCAAATACAAACCATTTCTTCTGCTACTATAACTCCTGCTTCTCCGTCTCAAGTACAGGGGAGTGTGGGGGGTATTGCTAATCCCACCATATATATTTCACTTCGGTTAATAACAATATTCAGACTTAACCTCTATACTGGCAAAGTTGAGACCTTTACCGTGGTGAGCTGGTGTTTTCCGAGGCCAGTCTGATCAGTGGCAGGTGGAAAAAGGTTTTAAACGGGAAATTAACTTTGcccaagaaaaatacaaatgttttttccacACTAATGTTCATCTTTGACATGAACATGAAAAGAGAagcaaccccccccctccttccccATCTTGAGCCACATCATcagttaaatacaatataaaacatcccca

Function


GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA


RNA id representative length rna type GC content exon number start site end site
TU27322 True 1626 lncRNA 0.36 1 6687484 6689109

Neighbor


gene id symbol gene type direction distance location
AMCG00007184 NA coding downstream 10503 6675666 ~ 6676981 (-)
AMCG00007185 bbox1,LOC106587091,LOC106561934,LOC107682871 coding downstream 27222 6655413 ~ 6660262 (-)
AMCG00007177 NA coding downstream 315086 6357010 ~ 6372398 (-)
AMCG00007176 NA coding downstream 565108 6121702 ~ 6122376 (-)
AMCG00007172 nr1h3,LOC107553099,LOC107689968,LOC107664377 coding downstream 599443 6081535 ~ 6088041 (-)
AMCG00007188 fibin,LOC103373419,LOC104955317,LOC107740499,LOC107553104 coding upstream 471 6689580 ~ 6690200 (-)
AMCG00007189 ano3 coding upstream 52588 6741697 ~ 6756583 (-)
AMCG00007190 NA coding upstream 75115 6764224 ~ 6778550 (-)
AMCG00007191 NA coding upstream 238491 6927600 ~ 6943044 (-)
AMCG00007192 NA coding upstream 272621 6961730 ~ 6967694 (-)
G21787 NA non-coding downstream 42606 6638997 ~ 6644878 (-)
G21786 NA non-coding downstream 49175 6635583 ~ 6638309 (-)
G21756 NA non-coding downstream 117745 6566217 ~ 6569739 (-)
G21739 NA non-coding downstream 167748 6519123 ~ 6519736 (-)
G21722 NA non-coding downstream 346313 6340779 ~ 6341171 (-)
G21807 NA non-coding upstream 15300 6704409 ~ 6704662 (-)
G22057 NA non-coding upstream 1064305 7753414 ~ 7753697 (-)
G22077 NA non-coding upstream 1211693 7900802 ~ 7901175 (-)
G22111 NA non-coding upstream 1224495 7913604 ~ 7984510 (-)
G22191 NA non-coding upstream 1562918 8252027 ~ 8252664 (-)
AMCG00007173 madd other downstream 633420 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 867200 5816809 ~ 5820284 (-)
G21429 NA other downstream 1630078 5056787 ~ 5057406 (-)
G21426 NA other downstream 1637964 5041659 ~ 5049520 (-)
AMCG00007091 ckap5,LOC108269026 other downstream 3186814 3476068 ~ 3500670 (-)
AMCG00007201 NA other upstream 635315 7324424 ~ 7342341 (-)
G21942 NA other upstream 810338 7499447 ~ 7506875 (-)
G22200 NA other upstream 1704087 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 2768379 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 3270953 9960062 ~ 10001165 (-)

Expression



Co-expression Network