G22077


Basic Information

Item Value
gene id G22077
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 7900802 ~ 7901175 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU27672
NNNTTTTTTTTCAACTAAAATCTTATTTTACTGTTGTATtcaagttttatatttgtacttaCCTACTTTTTACAAGTTCTGTTTTGCATATAGTaggttaaaacattaatttttgTATGAGAGAAATGGAATCCGTTGATTCTTTACTgtattcacattttatagatATATGACCTAAGGGAATTCATGTCAGTAACCATTTCTCACTGTCATACATGCATGTAACGTTTCAGTCTGAAGCTCTCCTTCCTTAATATTTGTGAACCATGATtgctaaatatattaaacattatttaacattGAAAAAAGGTTTAGTGGaagctttttaaaactgaaactggaCTCACTTTAATAAAGATGTTAATAAACTGGAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27672 True 374 lncRNA 0.28 1 7900802 7901175

Neighbor

gene id symbol gene type direction distance location
AMCG00007221 NA coding downstream 153357 7744536 ~ 7747445 (-)
AMCG00007222 LOC108433033,LOC107740331 coding downstream 171758 7715204 ~ 7729044 (-)
AMCG00007215 LOC107551386,LOC107735837 coding downstream 260898 7632618 ~ 7639904 (-)
AMCG00007212 hps5 coding downstream 270626 7615156 ~ 7630176 (-)
AMCG00007213 NA coding downstream 286390 7606583 ~ 7614412 (-)
AMCG00007229 swap70,swap70b,LOC107686252,LOC107569662,LOC107756911,LOC108423449,LOC107740330,LOC108264467 coding upstream 998 7902173 ~ 7927369 (-)
AMCG00007227 wee1,LOC107758614,LOC106587548,LOC107583885,LOC107580369 coding upstream 27331 7928506 ~ 7934299 (-)
AMCG00007228 NA coding upstream 35087 7936262 ~ 7946941 (-)
AMCG00007226 ipo7,LOC106587545,LOC106562356 coding upstream 46539 7947714 ~ 7971575 (-)
AMCG00007238 NA coding upstream 202313 8103488 ~ 8104939 (-)
G22057 NA non-coding downstream 147105 7753414 ~ 7753697 (-)
G21807 NA non-coding downstream 1196140 6704409 ~ 6704662 (-)
G21803 NA non-coding downstream 1211693 6687484 ~ 6689109 (-)
G21787 NA non-coding downstream 1255924 6638997 ~ 6644878 (-)
G21786 NA non-coding downstream 1262493 6635583 ~ 6638309 (-)
G22111 NA non-coding upstream 12429 7913604 ~ 7984510 (-)
G22191 NA non-coding upstream 350852 8252027 ~ 8252664 (-)
G22193 NA non-coding upstream 352718 8253893 ~ 8254667 (-)
G22217 NA non-coding upstream 538677 8439852 ~ 8443144 (-)
G22249 NA non-coding upstream 789023 8690198 ~ 8690751 (-)
G21942 NA other downstream 393927 7499447 ~ 7506875 (-)
AMCG00007201 NA other downstream 558461 7324424 ~ 7342341 (-)
AMCG00007173 madd other downstream 1846738 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 2080518 5816809 ~ 5820284 (-)
G21429 NA other downstream 2843396 5056787 ~ 5057406 (-)
G22200 NA other upstream 492021 8393196 ~ 8396224 (-)
AMCG00007267 NA other upstream 1556313 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 2058887 9960062 ~ 10001165 (-)
AMCG00007299 NA other upstream 2251305 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other upstream 2286133 10187308 ~ 10190204 (-)

Expression


Co-expression Network