G22249


Basic Information

Item Value
gene id G22249
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 8690198 ~ 8690751 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU27884
GCTGATGAAATTCTTGGCTCTTCTCCAGGAAATCTGCTTCTCCAATAGACAAGAAATACTTAAGCTGCAGCATTAAGTATTGCAATGCACAGTCAATCATGTCCTACTCACTGCCTTTAAAATATAGGGTCGcacaaaacaaagggaaaaaactaattgcaactgaaatataaatatttgttgtttgtttctcagtGGCTGGGTGGAAAATGTAATCATGGTCAACACTTTATTACTTCGAGAGGTTTCTGTGAAAGGTTCGAGTCAACTTGACTTTTCTAAACATGCAGGGCTTTTGAGGGGGGGTTCATTCAGTGCAATCTAGCTTACAGTTAACAGAATCAGCGTTATCAGTTCCAGTTGCTGATATCAAATCTGGAGAGTGGAATGGTGATTCAATGGATAATAGGTATTACCCCCATGTGCCTTGGACTGCAGTTTTTATTACACTGTGTTTGGGTACTCTGGGCTCAGACCTGCATTTTGGTTCATCCTGTAACTACCTTGTCAGAATTATGAGGGGTGGCTAATGTCTGATAACCAATAACATTacc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU27884 True 554 lncRNA 0.40 1 8690198 8690751

Neighbor

gene id symbol gene type direction distance location
AMCG00007248 psma1,LOC107748950,LOC107687760 coding downstream 63853 8620538 ~ 8626345 (-)
AMCG00007247 copb1 coding downstream 72899 8603478 ~ 8617299 (-)
AMCG00007246 rras2,LOC106676223 coding downstream 129758 8552097 ~ 8560440 (-)
AMCG00007240 tub,LOC106587536,LOC106562367,LOC107750543,LOC107754678 coding downstream 223404 8443327 ~ 8466794 (-)
AMCG00007239 rpl27a,LOC107687759 coding downstream 507012 8180558 ~ 8183186 (-)
AMCG00007249 LOC105889041 coding upstream 4710 8695461 ~ 8698149 (-)
AMCG00007255 sox6,LOC107700618,LOC107593388,LOC107754684 coding upstream 290819 8981570 ~ 9011201 (-)
AMCG00007256 sox6 coding upstream 401181 9091932 ~ 9098606 (-)
AMCG00007261 NA coding upstream 497860 9188611 ~ 9233981 (-)
AMCG00007260 plekha7,LOC103378745 coding upstream 627429 9318180 ~ 9318690 (-)
G22217 NA non-coding downstream 247054 8439852 ~ 8443144 (-)
G22193 NA non-coding downstream 435531 8253893 ~ 8254667 (-)
G22191 NA non-coding downstream 437534 8252027 ~ 8252664 (-)
G22111 NA non-coding downstream 705688 7913604 ~ 7984510 (-)
G22077 NA non-coding downstream 789023 7900802 ~ 7901175 (-)
G22298 NA non-coding upstream 285366 8976117 ~ 8980818 (-)
G22305 NA non-coding upstream 490267 9181018 ~ 9184829 (-)
G22393 NA non-coding upstream 727017 9417768 ~ 9437269 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding upstream 907941 9598692 ~ 9599154 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding upstream 933815 9624566 ~ 9624878 (-)
G22200 NA other downstream 293974 8393196 ~ 8396224 (-)
G21942 NA other downstream 1183323 7499447 ~ 7506875 (-)
AMCG00007201 NA other downstream 1347857 7324424 ~ 7342341 (-)
AMCG00007173 madd other downstream 2636134 6007640 ~ 6054064 (-)
G21632 psmc3,prs6a,LOC107758446 other downstream 2869914 5816809 ~ 5820284 (-)
AMCG00007267 NA other upstream 766737 9457488 ~ 9463337 (-)
AMCG00007282 NA other upstream 1269311 9960062 ~ 10001165 (-)
AMCG00007299 NA other upstream 1461729 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other upstream 1496557 10187308 ~ 10190204 (-)
AMCG00007298 NA other upstream 1574294 10265045 ~ 10272695 (-)

Expression


Co-expression Network