G22513


Basic Information

Item Value
gene id G22513
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10085760 ~ 10086383 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28226
TCAACACTGTACCATTTGTAGTTTATTCAATCCAATCATCTTGTATACATCAAAAAGTGAGATAATCAAGAGTTCAATTTTGCCAAAAGACAAATTACAAAAGTCGGTAACtgttaaaatagttaaaaaaaaaaaaaaaaaaaaaaaaaaaccaaaaaaaaaaaaaaaagcctaaagTCTTCAGCTCACATTCAATTTGATCGTTTAGCATTtgttgggggaaaataataattaaaaatgagttATGCGTACTCAACCCATTAAActctaaacaaatgtattgctaCCTGGTATTTAACGGAAACGCTTATCTGTGCAATCTGCTTAGTATTTGTTATTGTCCCTGCCCCACACACAGATTGTCAAGTGTTACTAATTGTTTTACCTATTTGGATTTTGCAAAGCCCACCCTGTTATTCTCCCGATCAAATTCAGTGTAGTACTGGCCAATGAACACATCTCCCAGAATCCACAGGGGCCCAGCTGGAGCGGGGATGTCAAGTCCCATGAATCCACTCAGACAGATAGTGTGCCCGGCCTGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28226 True 542 lncRNA 0.36 2 10085760 10086383

Neighbor

gene id symbol gene type direction distance location
AMCG00007281 LOC105900426,LOC103035847,LOC108428822 coding downstream 29631 10049181 ~ 10056129 (-)
AMCG00007280 LOC107758757,LOC107549278 coding downstream 48643 10035541 ~ 10037117 (-)
AMCG00007279 NA coding downstream 54077 10025484 ~ 10031683 (-)
AMCG00007283 tnnt3b,LOC105906454,LOC107703302,LOC107742575 coding downstream 142536 9939191 ~ 9943224 (-)
AMCG00007274 ush1c,LOC106561052 coding downstream 293593 9754924 ~ 9792167 (-)
AMCG00007291 NA coding upstream 4930 10091313 ~ 10096701 (-)
AMCG00007290 NA coding upstream 75069 10161452 ~ 10186176 (-)
AMCG00007294 sirt3 coding upstream 132932 10219315 ~ 10228702 (-)
AMCG00007296 NA coding upstream 161894 10248277 ~ 10260107 (-)
AMCG00007297 NA coding upstream 227208 10313591 ~ 10319631 (-)
G22505 NA non-coding downstream 41445 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 444931 9633809 ~ 9640829 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding downstream 460882 9624566 ~ 9624878 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding downstream 486606 9598692 ~ 9599154 (-)
G22393 NA non-coding downstream 648491 9417768 ~ 9437269 (-)
G22619 api5 non-coding upstream 287356 10373739 ~ 10375219 (-)
G22660 NA non-coding upstream 460613 10546996 ~ 10578902 (-)
G22680 clg19h11orf96 non-coding upstream 524806 10611189 ~ 10612988 (-)
G22671 NA non-coding upstream 541965 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 567791 10654174 ~ 10655530 (-)
AMCG00007282 NA other downstream 84595 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 622423 9457488 ~ 9463337 (-)
G22200 NA other downstream 1689536 8393196 ~ 8396224 (-)
G21942 NA other downstream 2578885 7499447 ~ 7506875 (-)
AMCG00007201 NA other downstream 2743419 7324424 ~ 7342341 (-)
AMCG00007299 NA other upstream 66097 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other upstream 100925 10187308 ~ 10190204 (-)
AMCG00007298 NA other upstream 178662 10265045 ~ 10272695 (-)
G22838 NA other upstream 3265134 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3859260 13945643 ~ 13946065 (-)

Expression


Co-expression Network