G22619 (api5)


Basic Information

Item Value
gene id G22619
gene name api5
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10373739 ~ 10375219 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28372
TCCTGAAATTGCCTTCCCATACATTAGAGATGCAGGGGGGTGGGAGAGTGGGTTGTAGTTCTTACAGAGACATCTTCATCCTCACAGAGGTCAAGCTGTGAGTTGATGGCGGCATCAGCCAACTCTGGGAAACTCTTGAAGAACTTGGGGATAAACTGGGCTGCCAACCGCTTTTCCTTCGGACCGCCTTTCACCCCATCCAAGATCACCTGGTAAGCATCTTTGTGCTGGCTAATATTATCCTTGGCGTCTGCGAGGATTCCGTAGTTACGATATAGCTCTTCCACCGAGACCGCCATGAGCGTGTGTAGATACAGCAAGATATTTCAGGCGCTTCCCTCTCTGTCGTTTATCGGTTTTCTCTGTTCCGCAGCTTACTAAAGCCTTTCCCTTTTAATAACCTCTTTCTCTCCACACTGGTCAGGTCCTTACTGTCCCTTTCCGCCGAGATATCTCGGTAGGAGAATTTTCCAGAAAACGCCGCTCtaggatacaatagttcccAGTTTACGAATAACCCTTACAAACGT

Function

symbol description
api5 Predicted to enable RNA binding activity. Predicted to be involved in negative regulation of apoptotic process. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in nucleus. Is expressed in heart. Orthologous to human API5 (apoptosis inhibitor 5).

NR:

description
PREDICTED: apoptosis inhibitor 5

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28372 True 530 lncRNA 0.48 2 10373739 10375219

Neighbor

gene id symbol gene type direction distance location
AMCG00007302 NA coding downstream 792 10361701 ~ 10372947 (-)
AMCG00007295 NA coding downstream 46918 10320340 ~ 10326821 (-)
AMCG00007297 NA coding downstream 54108 10313591 ~ 10319631 (-)
AMCG00007296 NA coding downstream 113632 10248277 ~ 10260107 (-)
AMCG00007294 sirt3 coding downstream 145037 10219315 ~ 10228702 (-)
AMCG00007309 NA coding upstream 377019 10752238 ~ 10753836 (-)
AMCG00007312 NA coding upstream 1768697 12143916 ~ 12262705 (-)
AMCG00007314 NA coding upstream 1887614 12262833 ~ 12263877 (-)
AMCG00007313 NA coding upstream 1888675 12263894 ~ 12307056 (-)
AMCG00007315 lrrc4c,LOC106573348,LOC107670198 coding upstream 1942612 12317831 ~ 12319714 (-)
G22513 NA non-coding downstream 287356 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 329424 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 732910 9633809 ~ 9640829 (-)
G22415 alx4,LOC107593440,LOC106587508,LOC107688160,LOC107750553,LOC107683603,LOC107754690 non-coding downstream 748861 9624566 ~ 9624878 (-)
G22414 LOC106562319,LOC107683603,LOC107754690,LOC106587508,LOC107750553,LOC107688160 non-coding downstream 774585 9598692 ~ 9599154 (-)
G22660 NA non-coding upstream 171777 10546996 ~ 10578902 (-)
G22680 clg19h11orf96 non-coding upstream 235970 10611189 ~ 10612988 (-)
G22671 NA non-coding upstream 253129 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 278955 10654174 ~ 10655530 (-)
G22713 NA non-coding upstream 736126 11111345 ~ 11111723 (-)
AMCG00007298 NA other downstream 101044 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 126993 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 183535 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 372574 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 910402 9457488 ~ 9463337 (-)
G22838 NA other upstream 2976298 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3570424 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 3606155 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 5862242 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 5945778 16320997 ~ 16345580 (-)

Expression


Co-expression Network