G22652


Basic Information

Item Value
gene id G22652
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10626674 ~ 10685068 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28422
CTGAGAAATGTCTTTTAATGGTTCTGCGTTAAAAGCACTAGAAGCTCGTGTGCCAGGAAGCTTTATTTATCCATTTGGTTCCCAACAATCAAGAGTTGGCAGGGGATGCAAGTCTTGTGCTTGGTTGCTGCTTGAGCTCCAAAACTGGGCTGAAGTCTTGAATATAGCCCCTGGAAAGCCTGATACTTCAACTGATACTGAGCCCTAGTGTTTATCTTCTATTTCTATAAACATGAATGATGAATATTAGTGCTAGGGGGACTGACTCTGGAGTGAATACAGACTTCATTTCTGTTTATCCAAAATGCTGTTGTTAAACAGACAGCTGCTCATGTATGCCTTGGCTTGGTAGTACAGGCACTGGCTCTTGAGTAGTTTAAAAAGAACAGacatatattttatagataGTGTTAAACAACATCTGAAAGCACTTACCAAATGCTGGGTGCAGTTTAAAGTTCAGCAGTGTTATACAGCATGCACAAACaagtaatcaaaataaaataaagtatatagtCTAAGAAAGCACAGATACTTTATTCAGagtattatacatttccaaTGTTTACTCAGAGGCTATTATAACATGTACAAATCCAAACCCACCAACCCAACAATACACATATGATGATAGAGGATGTTTTACAAGTACCACAATCATCCCACTGTATTtttgcactttgtattgctcttatattttgtaagtc

Function

GO: NA

KEGG:

id description
ko04913 Ovarian steroidogenesis

RNA

RNA id representative length rna type GC content exon number start site end site
TU28422 True 707 lncRNA 0.37 2 10626674 10685068
Loading

Neighbor

gene id symbol gene type direction distance location
AMCG00007304 NA coding upstream 17659 10577246 ~ 10609015 (+)
AMCG00007303 NA coding upstream 49510 10534157 ~ 10577164 (+)
AMCG00007300 LOC106562579,LOC106593862,LOC106597634 coding upstream 205763 10394165 ~ 10420911 (+)
AMCG00007301 api5,LOC104957150 coding upstream 243391 10373970 ~ 10383283 (+)
AMCG00007292 NA coding upstream 269069 10343702 ~ 10357605 (+)
AMCG00007306 rag1 coding downstream 53977 10739045 ~ 10743675 (+)
AMCG00007310 NA coding downstream 73766 10758834 ~ 10777707 (+)
AMCG00007311 NA coding downstream 903566 11588634 ~ 11603718 (+)
AMCG00007317 NA coding downstream 2856688 13541756 ~ 13551121 (+)
AMCG00007321 mrpl21,LOC106561938 coding downstream 2938076 13623144 ~ 13624807 (+)
G22596 NA non-coding upstream 304816 10320469 ~ 10321858 (+)
G22528 NA non-coding upstream 385266 10152489 ~ 10241408 (+)
G22417 NA non-coding upstream 981927 9642597 ~ 9644747 (+)
G22373 NA non-coding upstream 1134007 9488712 ~ 9492667 (+)
G22364 NA non-coding upstream 1230194 9396221 ~ 9396480 (+)
G22712 NA non-coding downstream 426275 11111343 ~ 11111723 (+)
G22720 NA non-coding downstream 544757 11229825 ~ 11230393 (+)
G22730 NA non-coding downstream 827085 11512153 ~ 11522358 (+)
G22738 NA non-coding downstream 855915 11540983 ~ 11541524 (+)
G22741 NA non-coding downstream 885884 11570952 ~ 11573862 (+)
AMCG00007307 clg19h11orf96 other upstream 13570 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 661407 9936920 ~ 9965267 (+)
G22372 NA other upstream 1126946 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 1915363 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 2175092 8431102 ~ 8451582 (+)
AMCG00007337 NA other downstream 3793605 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 4591643 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 4681593 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 5939322 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 7513550 18198618 ~ 18201960 (+)

Expression

G22652 Expression in all Baseline Samples

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The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 60.
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G22652 Expression in each Bioproject

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G22652 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 80.
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Co-expression Network