G22671


Basic Information

Item Value
gene id G22671
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10628348 ~ 10631934 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28447
NNNGATAAGCATGTATTCAATTGTTCAACCCAAAATCTAAACAAGGGTATATATTGTACTGGGATTTTTATTGCACACTCTTCTCAACAAAATATCCAACCTCATTTGCAATTAAAGCTGGGTGTACTCTGGGTATTGTGTTACACAGTGCTAAAAGAAGAAGCTTATTTGCGTCCTCCAGAGTTTACACAGGGTGGACTGTCACGCTGCATTTTCTGGTTTGTAAAATCATCATATCTATTATCATGGTTGGCCTTCCCCATTACAGTGAAAGAGAATATGTCCAGATTGCTCTCTGCTGCGTCCAGAAATACTGTGGGTTTGGGACGGCTTGTCAAAAAGAGTCTGGCTTAGATCCTCCAAGATGGAAGGAGGCATACGATTGCTTTATTCCTGTTGATATGCTGTAGCTGCAGCCCTCTAGGCTCTGTTATTGATCTTAACCTTCTTGCACCTATAGAAACCCCCAGATCCccccagaagaaaaaaagcactcAATTTTTTCAAAAACCTTCTTCTGGATCACCAGGAAGGAAATCCAGTAGAGCAATGAATTTGCAGAAGAAGTGTGCAGTGCTGAAGTGAAGGAgagagctgctgctgcttcaggCAGTCAGGACCAGAAACACTGTTGCAAAATCGGGGGATTGTCCCCCAAATGTGGGGGATTTTTAAGAGCCCAGGGGGAAATTTAGGGGCAATACTTGTATGGGGGAAATGTTGGGGGATAATATTTGGGACCTGGGGGAATTTAGGGGTTTGGCACAGTTGATCCCCCCCGGACCTCACTTCACCAGCAGCACCCCTCCgccctcattttgttttaaatacatgatttgggggatttttaggACAAGACTGGGGGAAATTATGgagaggacctggcaacactgACCAGAAACCCAGGGCCACATCATGTTGCATCCAACCGgTTTAACCCGAGTTAAAAACAAATCGTGCCGCAGATGTGTGCACTCCCCCGGGGGCGCTCCCTCTCCTGTGCAGCCCGCAGGCACCCAGCCCGGCCTGGCCCGGGACAGCTCGCACGGCCTCTCGGGCTCTGATGGCACTGGCAGAAAACggtaaatattgttattttgtccAGATAATAAAATGGGGGAAGAAGCGAAAATTTGTACATCCGGGTTGACGGCACATGCGTGCTGTCCTTATTCCGGGATAACTTTGGTCCGTGTCAGTCATTTTGCACAGGCTGGCAAAGGGGCATTTTACAGTAAAAGCGCAAACGGGGGGAAACATGCGAGCTCATCAGCCTCGTCAGCTCCCTCTTGTGGACACAGCGTGTTATTGAATAGCCTGGCTAACTTCTTCAGGATACAGTCGAAGTGCAAAACTTTGATTAGAGATATCTtccaaagaaaatgttaaacaattGTTTCTTACCTGCTAAGTATTATATGCACTTTAcacttttacattaaaatatttcgGTAATAGCTAAGTCACAACAAAGTTTATAAGCTTTAGAGTTAGTGtagtggtattattattattattattattattattattattattattattattcaaatggtAGTGCCTACTACAACAGAAACTGCAACCAAATATTGTCAGAAAAgggtttttttcagtttcctgGTAAAATTATTTCTGGTTCCATATCTGCAAAGCTCTGGaggttttcatttccatttaccTGTACTATCATAATGGAGGGAATCCCATCTTACCACTTTGGATTGTAGTAATTAATGGATTCAAgaatcttattttgttttgattttgtctatCTCAGGAGGGCCCCACATGCATTTTTGGCATCTCTTAATTAGTGACTTCAGTTATCAATTACTGTGATAGTTTGTCGTTCTGTTCTCAACAGCATCTCCTATTATTAAGGGTctctataaaataaacatgttgagCATCACTTGCAAATTCCTAAATTAATGTGTAGGAAGTTACAGTTGGGGTTTGATATTAGCAGGAGTGTAGGCTTttccatttaattacattattattattattattattattattattattattattattat

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28447 True 2039 lncRNA 0.41 2 10628348 10631934

Neighbor

gene id symbol gene type direction distance location
AMCG00007302 NA coding downstream 255401 10361701 ~ 10372947 (-)
AMCG00007295 NA coding downstream 301527 10320340 ~ 10326821 (-)
AMCG00007297 NA coding downstream 308717 10313591 ~ 10319631 (-)
AMCG00007296 NA coding downstream 368241 10248277 ~ 10260107 (-)
AMCG00007294 sirt3 coding downstream 399646 10219315 ~ 10228702 (-)
AMCG00007309 NA coding upstream 120304 10752238 ~ 10753836 (-)
AMCG00007312 NA coding upstream 1511982 12143916 ~ 12262705 (-)
AMCG00007314 NA coding upstream 1630899 12262833 ~ 12263877 (-)
AMCG00007313 NA coding upstream 1631960 12263894 ~ 12307056 (-)
AMCG00007315 lrrc4c,LOC106573348,LOC107670198 coding upstream 1685897 12317831 ~ 12319714 (-)
G22680 clg19h11orf96 non-coding downstream 15360 10611189 ~ 10612988 (-)
G22660 NA non-coding downstream 49446 10546996 ~ 10578902 (-)
G22619 api5 non-coding downstream 253129 10373739 ~ 10375219 (-)
G22513 NA non-coding downstream 541965 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 584033 10033128 ~ 10044315 (-)
G22687 NA non-coding upstream 22240 10654174 ~ 10655530 (-)
G22713 NA non-coding upstream 479411 11111345 ~ 11111723 (-)
G22725 LOC103376870 non-coding upstream 632708 11264642 ~ 11282409 (-)
G22732 NA non-coding upstream 731663 11363597 ~ 11412595 (-)
G22739 NA non-coding upstream 909048 11540982 ~ 11541638 (-)
AMCG00007298 NA other downstream 355653 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 381602 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 438144 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 627183 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 1165011 9457488 ~ 9463337 (-)
G22838 NA other upstream 2719583 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3313709 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 3349440 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 5605527 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 5689063 16320997 ~ 16345580 (-)

Expression


Co-expression Network