G22680 (clg19h11orf96)


Basic Information

Item Value
gene id G22680
gene name clg19h11orf96
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 10611189 ~ 10612988 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28459
cagtAAATAGGAAAGCTCCAGCTTTCatgtgtgtaaaataacattataaagtttagaatattttcttttttttaccaaCAGGTGAtttagaaacaaagaaagaaaggagaataTATTCCATTTCCATATCAAAACATATCAGTTCAATAAATATCAACACCATTTAACACAAGCATACACAGTAAACTTGCACTTCTCTTTCCTCCAATacaaaatcatattaataataatatctgtcaTCAAGGTTCTCATGTTTCCTTACAAAGTGGTCGACTTCTGCCAATAATGTTCGGTGTTTAGAAGTGCAGCTCCCTTATGTAGGGCTGCTGGCGAGAATTCAACTATACTTTCTGTCCCTTAAACAAAGTAAACCCTCCCCCTTTTTACAGGAGTCTGATAAAAATGGCATATCCATTGCTTGCATACTTTGCACACTTAATGAGTGTCCGATGGTTCTCGATTAATCTCAAGTCCTCCGAGCCAGACATTGTGTGCGCGTCTCCGGTCATCACACTTTCTGGATTCTTTAATTCTCTGTTGCAGAACATTCCCAACAACTAGCATACATCCCTGAACTGCTGCTGCCTGACCCGACTTGCTGCTTGCATTTCAGCAGATATTCGCAGGCACaatgttaaaaaaggaaaacattttctatattatCAAAGACCCCCCCCTATTAATTaaactccccttcctctccattATATGTACcttgaaagaaaaagattgCATTGGCAATTTACCCCTGTGTTACAGCAATACACTGCAATTCATCAGTTTGCAAAAGGAATCACTACACTTTGATTCGTAAAGCATGCCTAAGCTTTTAACAGCCTACATTAAACctcaattttaaatgcatcaaatgcatacatacatatatatatataaatattgaaataaataccaatgcttaaatgtatattgagcagatttgttctagatatttgttaaaaaaaaagttcaaatacAGTCAGGCTTCATTATGAAGCAAGCGGCAGCCCCAGCGATCACCGAGGTCTGCGTGGGGGAAAAACGGTCCTTTTCTACTGCGTGGAGTCTGAGTCGCTGGAGTCCACACTGCCCTGCATGGCGGACGTAGCCACCCAGCCCTTGGGGCAGTGGCTGGAGCTGTGCAAGTTCTGAGTACTGCGTCTCAGGCTTTCCAGCGACTGCAAGAAGGACTTCCGGGCTCGCTCTTCCTCCAGCGCCGAAACACCTTCCTCCTCCACTTCAGCGATCTCAGCGAAGGTCACTGGTTGGGTCTTGAAGCGGGACTGGCGGGGGCGGCGCATCCGGCTCTTGCCCCTGGCCGGGGATTTGGGCACAGGCAGATGCTGGGGAAATTCCTCCATCATAGCTGCCAGCAGGTGAGCAGGCACCACGGTCTGGTACCCTCCTGACTCCACGTGTCTGCTTGCCATGGCTCCTCGCGGAACTTCTTGGAGGCTGTGGGTGGCAGTAGAAACAATGGGCGAGACCAAAGGGTTTGTGGACCTTCTCCTTCAGGAAACGAGAGTCTTTTCTTGTCTCagtgaatgttttgtttttaaatcccagATGGTCAGAGTGTCAAGGTGAATCTGATCCTCCTCTGCTCTCCTTGCCTTTGCTGGCTCGCTGATTGTGATCCTGTTCAAGGCAGTTTAGTGCAGCAGGCACTGGGCTGTTGTAGCTTGCTTGGCTTGATGCTGTTGCTTCTGCTGCagctgctctcactctctctgcttTTGCACTGAACTCAGGCAGGCAGCCGTGGATTTATATA

Function

NR:

description
PREDICTED: uncharacterized protein C11orf96 homolog

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28459 True 1771 lncRNA 0.45 2 10611189 10612988

Neighbor

gene id symbol gene type direction distance location
AMCG00007302 NA coding downstream 238242 10361701 ~ 10372947 (-)
AMCG00007295 NA coding downstream 284368 10320340 ~ 10326821 (-)
AMCG00007297 NA coding downstream 291558 10313591 ~ 10319631 (-)
AMCG00007296 NA coding downstream 351082 10248277 ~ 10260107 (-)
AMCG00007294 sirt3 coding downstream 382487 10219315 ~ 10228702 (-)
AMCG00007309 NA coding upstream 139250 10752238 ~ 10753836 (-)
AMCG00007312 NA coding upstream 1530928 12143916 ~ 12262705 (-)
AMCG00007314 NA coding upstream 1649845 12262833 ~ 12263877 (-)
AMCG00007313 NA coding upstream 1650906 12263894 ~ 12307056 (-)
AMCG00007315 lrrc4c,LOC106573348,LOC107670198 coding upstream 1704843 12317831 ~ 12319714 (-)
G22660 NA non-coding downstream 32287 10546996 ~ 10578902 (-)
G22619 api5 non-coding downstream 235970 10373739 ~ 10375219 (-)
G22513 NA non-coding downstream 524806 10085760 ~ 10086383 (-)
G22505 NA non-coding downstream 566874 10033128 ~ 10044315 (-)
G22416 alx4,alx4a,LOC107754690,LOC107593440,LOC107683603,LOC103356993 non-coding downstream 970360 9633809 ~ 9640829 (-)
G22671 NA non-coding upstream 15360 10628348 ~ 10631934 (-)
G22687 NA non-coding upstream 41186 10654174 ~ 10655530 (-)
G22713 NA non-coding upstream 498357 11111345 ~ 11111723 (-)
G22725 LOC103376870 non-coding upstream 651654 11264642 ~ 11282409 (-)
G22732 NA non-coding upstream 750609 11363597 ~ 11412595 (-)
AMCG00007298 NA other downstream 338494 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 364443 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 420985 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 610024 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 1147852 9457488 ~ 9463337 (-)
G22838 NA other upstream 2738529 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 3332655 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 3368386 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 5624473 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 5708009 16320997 ~ 16345580 (-)

Expression


Co-expression Network