G22725 (LOC103376870)



Basic Information


Item Value
gene id G22725
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 11264642 ~ 11282409 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU28510
caacacagcaagcagtcggaatatataaggcactatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccatagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgattcgacctttgtgacatggtgcattatcctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggtcagaaacaatgctcaggtaggccgtggcatttaaacgaTGCCCGATTGGCACTAAGGGGCCT

Function


NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU28510 True 496 lncRNA 0.46 2 11264642 11282409

Neighbor


gene id symbol gene type direction distance location
AMCG00007309 NA coding downstream 510806 10752238 ~ 10753836 (-)
AMCG00007302 NA coding downstream 891695 10361701 ~ 10372947 (-)
AMCG00007295 NA coding downstream 937821 10320340 ~ 10326821 (-)
AMCG00007297 NA coding downstream 945011 10313591 ~ 10319631 (-)
AMCG00007296 NA coding downstream 1004535 10248277 ~ 10260107 (-)
AMCG00007312 NA coding upstream 861507 12143916 ~ 12262705 (-)
AMCG00007314 NA coding upstream 980424 12262833 ~ 12263877 (-)
AMCG00007313 NA coding upstream 981485 12263894 ~ 12307056 (-)
AMCG00007315 lrrc4c,LOC106573348,LOC107670198 coding upstream 1035422 12317831 ~ 12319714 (-)
AMCG00007316 NA coding upstream 1780385 13062794 ~ 13264962 (-)
G22713 NA non-coding downstream 152919 11111345 ~ 11111723 (-)
G22687 NA non-coding downstream 609112 10654174 ~ 10655530 (-)
G22671 NA non-coding downstream 632708 10628348 ~ 10631934 (-)
G22680 clg19h11orf96 non-coding downstream 651654 10611189 ~ 10612988 (-)
G22660 NA non-coding downstream 685740 10546996 ~ 10578902 (-)
G22732 NA non-coding upstream 81188 11363597 ~ 11412595 (-)
G22739 NA non-coding upstream 258573 11540982 ~ 11541638 (-)
G22744 NA non-coding upstream 313706 11596115 ~ 11596436 (-)
G22757 NA non-coding upstream 441083 11723492 ~ 11723746 (-)
G22768 NA non-coding upstream 581506 11863915 ~ 11864160 (-)
AMCG00007298 NA other downstream 991947 10265045 ~ 10272695 (-)
AMCG00007299 NA other downstream 1017896 10152480 ~ 10246746 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 1074438 10187308 ~ 10190204 (-)
AMCG00007282 NA other downstream 1263477 9960062 ~ 10001165 (-)
AMCG00007267 NA other downstream 1801305 9457488 ~ 9463337 (-)
G22838 NA other upstream 2069108 13351517 ~ 13352073 (-)
G22931 LOC100846954 other upstream 2663234 13945643 ~ 13946065 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other upstream 2698965 13981374 ~ 14033212 (-)
AMCG00007366 NA other upstream 4955052 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 5038588 16320997 ~ 16345580 (-)

Expression



Co-expression Network