G22730


Basic Information

Item Value
gene id G22730
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 11512153 ~ 11522358 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28516
aaaagacacctctccacagaagcaatcaatcaatcagattccaaactctccaccatggccaagaccaaagagctgtccaaggatgtcagggacaagattgtagacctacacaaggctggaataggctacaagaccatcaacaagcagcttggtgagaaggtgacaacagttggtgcgattattcgcaaatggaagaaacacaaaataactgtcagtctccctcggtctggggctccatgcaatatctcacctcATATAAAGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28516 True 263 lncRNA 0.46 2 11512153 11522358

Neighbor

gene id symbol gene type direction distance location
AMCG00007310 NA coding upstream 734446 10758834 ~ 10777707 (+)
AMCG00007306 rag1 coding upstream 768478 10739045 ~ 10743675 (+)
AMCG00007305 NA coding upstream 844858 10660181 ~ 10667295 (+)
AMCG00007308 NA coding upstream 857164 10628350 ~ 10654989 (+)
AMCG00007304 NA coding upstream 903138 10577246 ~ 10609015 (+)
AMCG00007311 NA coding downstream 66276 11588634 ~ 11603718 (+)
AMCG00007317 NA coding downstream 2019398 13541756 ~ 13551121 (+)
AMCG00007321 mrpl21,LOC106561938 coding downstream 2100786 13623144 ~ 13624807 (+)
AMCG00007322 NA coding downstream 2124269 13646627 ~ 13647013 (+)
AMCG00007328 NA coding downstream 2452947 13975305 ~ 13981853 (+)
G22720 NA non-coding upstream 281760 11229825 ~ 11230393 (+)
G22712 NA non-coding upstream 400430 11111343 ~ 11111723 (+)
G22652 NA non-coding upstream 827085 10626674 ~ 10685068 (+)
G22596 NA non-coding upstream 1190295 10320469 ~ 10321858 (+)
G22528 NA non-coding upstream 1270745 10152489 ~ 10241408 (+)
G22738 NA non-coding downstream 18625 11540983 ~ 11541524 (+)
G22741 NA non-coding downstream 48594 11570952 ~ 11573862 (+)
G22756 NA non-coding downstream 201134 11723492 ~ 11723746 (+)
G22760 NA non-coding downstream 290507 11812865 ~ 11813093 (+)
G22769 NA non-coding downstream 343078 11865436 ~ 11866024 (+)
AMCG00007307 clg19h11orf96 other upstream 899049 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 1546886 9936920 ~ 9965267 (+)
G22372 NA other upstream 2012425 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 2800842 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 3060571 8431102 ~ 8451582 (+)
AMCG00007337 NA other downstream 2956315 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 3754353 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 3844303 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 5102032 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 6676260 18198618 ~ 18201960 (+)

Expression


Co-expression Network