G22887


Basic Information

Item Value
gene id G22887
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 13631546 ~ 13631960 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28694
AGTACTGGTAGCAGTAATAATGTTCTGATGTGTCGGAAACATTACCTCTAaaatgttgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaaatacaggCTATATTTGTATGTACCAGTTTTATGTTCCTTTAAGCAGAGCTCGTTTGAGTTTTAAGTGCTGTGAACCAGTGAAATCTATATAAAACGTCCTGGTATGAGTGTAGGTGGGATTTGAGTGGGAACAGTTTCTGTAGAACATATCAATCTTCATGGATTGTGGTCTGTTTTAATCAGTTGCTTTTAAAAGCAAGTAAAAGTTTTGTACACGTGTTTTTAGAGTGTTTGTTCCACGGCtgtccatttgttttaaatgaacgATAATAACACTTGTATTCAAACACAATTAATACAGTTAATATTCTACAAATG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28694 True 415 lncRNA 0.35 1 13631546 13631960

Neighbor

gene id symbol gene type direction distance location
AMCG00007321 mrpl21,LOC106561938 coding upstream 6739 13623144 ~ 13624807 (+)
AMCG00007317 NA coding upstream 80425 13541756 ~ 13551121 (+)
AMCG00007311 NA coding upstream 2027828 11588634 ~ 11603718 (+)
AMCG00007310 NA coding upstream 2853839 10758834 ~ 10777707 (+)
AMCG00007306 rag1 coding upstream 2887871 10739045 ~ 10743675 (+)
AMCG00007322 NA coding downstream 14667 13646627 ~ 13647013 (+)
AMCG00007328 NA coding downstream 343345 13975305 ~ 13981853 (+)
AMCG00007327 NA coding downstream 417433 14049393 ~ 14064082 (+)
AMCG00007329 slc1a2,LOC107570361 coding downstream 526224 14158184 ~ 14185574 (+)
AMCG00007332 apip coding downstream 733748 14365708 ~ 14383919 (+)
G22844 NA non-coding upstream 139212 13483495 ~ 13492334 (+)
G22839 NA non-coding upstream 277090 13353613 ~ 13354456 (+)
G22837 NA non-coding upstream 279627 13351626 ~ 13351919 (+)
G22816 NA non-coding upstream 678450 12952875 ~ 12953096 (+)
G22781 NA non-coding upstream 1733409 11897543 ~ 11898137 (+)
G22888 NA non-coding downstream 5464 13637424 ~ 13637624 (+)
G22893 NA non-coding downstream 44997 13676957 ~ 13677701 (+)
G22930 LOC100846954 non-coding downstream 313678 13945638 ~ 13946065 (+)
G22932 NA non-coding downstream 390131 14022091 ~ 14022317 (+)
G22935 NA non-coding downstream 408832 14040792 ~ 14041060 (+)
AMCG00007307 clg19h11orf96 other upstream 3018442 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 3666279 9936920 ~ 9965267 (+)
G22372 NA other upstream 4131818 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 4920235 8697983 ~ 8711311 (+)
AMCG00007242 NA other upstream 5179964 8431102 ~ 8451582 (+)
AMCG00007337 NA other downstream 846713 14478673 ~ 14489692 (+)
AMCG00007352 NA other downstream 1644751 15276711 ~ 15287960 (+)
AMCG00007350 tsg101 other downstream 1734701 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 2992430 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 4566658 18198618 ~ 18201960 (+)

Expression


Co-expression Network