G23101 (LOC101154678)


Basic Information

Item Value
gene id G23101
gene name LOC101154678
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15024241 ~ 15024745 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28944
ttgttcttctggaaggttctcctctctccacagagacacgctggatcTCTGTCAAGTTGACCATCGGGTTcgtggtcacctccctgactaaggcccttctcccccgatcgctcagtttggccgggtggccagctctaggaagagtcctggtggttccaaacttcttccatttatggatgatggaggccactgtgctcattgggacctccaatgctgcagaaatgtttctgtacccttccccagatctgtgcctcgatacaatcctgtctcaaaggtctacagacaattccttggatttcatggcttggtttgtgctctaacatgcactgttaactgtgggaccttatatagacaggtgtgtgcctttccaaatcatgtccaatcaactgaatttaccacaggtggactccaattgtagaagttgtagaaacatctcaaggatgatcagtggaaacaggatgcacctgagctcaattttgagtgtcatggcaaaggctgtgaatac

Function

NR:

description
transposase, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28944 True 505 lncRNA 0.48 1 15024241 15024745

Neighbor

gene id symbol gene type direction distance location
AMCG00007340 NA coding downstream 86714 14935599 ~ 14937527 (-)
AMCG00007333 NA coding downstream 598737 14407144 ~ 14425504 (-)
AMCG00007331 NA coding downstream 697741 14286615 ~ 14326500 (-)
AMCG00007330 NA coding downstream 749807 14274060 ~ 14274434 (-)
AMCG00007324 NA coding downstream 1083570 13939340 ~ 13940671 (-)
AMCG00007344 LOC105018338,LOC107562830,LOC107675263,LOC107707530,LOC107085412,LOC103380394,LOC101069290 coding upstream 127683 15152428 ~ 15153708 (-)
AMCG00007347 NA coding upstream 151441 15176186 ~ 15184980 (-)
AMCG00007346 phrf1 coding upstream 164543 15189288 ~ 15210018 (-)
AMCG00007348 NA coding upstream 196352 15221097 ~ 15277958 (-)
AMCG00007349 NA coding upstream 263595 15288340 ~ 15313433 (-)
G23011 NA non-coding downstream 544042 14478596 ~ 14480199 (-)
G22971 NA non-coding downstream 834553 14184702 ~ 14189688 (-)
G22943 NA non-coding downstream 958943 14063495 ~ 14065298 (-)
G22942 NA non-coding downstream 962106 14061734 ~ 14062135 (-)
G22941 NA non-coding downstream 963112 14060770 ~ 14061129 (-)
G23105 NA non-coding upstream 106643 15131388 ~ 15131598 (-)
G23225 LOC103376870 non-coding upstream 709880 15734625 ~ 15800952 (-)
G23250 NA non-coding upstream 1043338 16068083 ~ 16069464 (-)
G23344 NA non-coding upstream 1353773 16378518 ~ 16380291 (-)
G23379 NA non-coding upstream 1636136 16660881 ~ 16662665 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 991029 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 1078176 13945643 ~ 13946065 (-)
G22838 NA other downstream 1672168 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 4751546 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 4834037 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 1212716 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 1296252 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 1444722 16469467 ~ 16621905 (-)
G23661 NA other upstream 3030725 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 3177714 18202459 ~ 18208020 (-)

Expression


Co-expression Network