G23130


Basic Information

Item Value
gene id G23130
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15217176 ~ 15309751 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU28981
agtgGTGATAAAACCTGCATTTACTCTTTTCGTCTTCAGTTGATAACACTGATCAGCATTTTTGTCAGGCAGGAAAAGTAAATAGCTGATTAGTACGTTCTGATTGCTTTTTTCAAGGAATTAAGCACCAGTATTTATCTTGGTAAAAGGTTTCATACTTTTACACATCTTTCAAAAACGCTTCCTGTCTCAAAGAGTCCTAGTCATAGAACACAAGTGGCAGCTGTATATATTCATCAGACCCCTCATGTGAATAGTTCCCCACACTACGTTTCTTATTGCCGGTTTTAGTTCTTGTCGTGTTCATTTTAGCAGCCTGTGACCACATTCCAAATGTGTAAAACCAAAAGCCGTAACATGACGCATTGCTTGGCAGTTAGGCCAAATTTTATCGGCCAACCAATAGAGGCTGTCAATCGTGAAAGCTATCAAATTCCACTCCtcaaaaatgtatgatttcatATAAAAGTGGAAGATTAGGGGTAACTATTGGTattaagtggaaaaaaacatcactttttGAGTGGTGTGTGTTTACAATTGGTGGGTGTATCagaataatgtgtgtgtgtgtgctgatgtttttttttttttaactgatatgATCAAATTACACCCAGCTTAGGGAGTTTTTCCAAAGACCAGGGAGCTAATGGTTCAGAGTTAATAGGAACAGTCAAGAAACATATAATATCTGGAAACACCAGAAATGGAGGAATATCTCCAGGAGAAATCAGAGAAGGGCCTTTGTACTTGAAAAGAATGCAGGCAATGGATTGTATTTCTTCTCAGTGTAAATCTATATGGCAGGAAAAATAAGTATTCCATTTTGCTTTTAGTCTATTTCTACACATAAAAATCATGCAGATACCACCTGGCTAGGGTTTAGGTGGTACTGTGGTTCTAGTTCTGTGTCAGGGAGTGCCACGGACCACTGATACATAGTAAAAGACGATAAAACAATGAAATCGGTGTTTGTTTAAGTTCTGGGTGTGTTTATCTTAGATTGACCTTATCTATTGtgcactgcactgcagaagTAGGTTTGTTTCTGTAAATGACTCATAGATAGGGATTGTCAGGAACTGAACAggagaaacaaattaacatttcacaAAGCTGGAAGAAATAATACTTCCCTCCATAAATCTTGAGTCTGAAACAGAGGGAGATAAGTGGGTAAGGCTTTGTACCAGTCACAGTTTACCGTTTCAGACCAGTGTATTTCACTACTGCTGTTTGACACCGATGTGACACTTTCCCACAAAACAGTGCTTTCTGTGCAGTTGCTTTGGCTGGAATAATTCAATAGCTTAGTTAGTGTGGCCGATCTTATTCTTAAAGGAAAGCAAAGGGAATAAACCAGAGCCAATACTATGGGAAGACTTGCAAGTATTGGGAATGTGaagattaatgtattaatatgtgCAAGATAGTCCTCGATGAGTGAAATCGTATGGCACAAGGAGCATGTGAAAGCAATTTCTGCATGAGTTTCTAATGTTACTAAATACAATTGAAAGTTGGTTGCAcagtaatttttttaaaaaaaaggcttAGGTTCAGTTGATAAGATCTTTTCAAAGGGCTTAGACAAAGTGTATTGTGTATTCACTTGCTGCACCTTTACAAAGGAAGAGATTCAGTTACATAAATCGGgctttgaaaaacagtttgcaGCTCACCTTCTTGTCTTGCCCCTTTGCAAAACCGTGCAGTACGTGTCCAGACGGGAACTTGAGACAGACCTGAAGACTTCTGTTAAGGCGATTGAGTCTGTTGAGTCTGCTACAAGTCTATTTCAGTCAGTGTTAcctcaaaacataaaaaaataataataatcaagaatcattttaaacttgtatttctgGTTACAGAATTAAGATATACTCTGGCACAGTACAAACTAAAAGGCATGGATGGATGGTGTGGAAAATATCGTAAACTGAGGACAATTCTTCAATTCGGCTAGACTTGATATCCCCACCTGCGTTTATTAGCCTTGAGGGCCAATTTTCTCTCAACAGGATCATATGTTTTATGATAAGCACATAGCGTATCAAATTATCACAGCGTTGCTAATTACACCTGATCCTGCAAAACCCAAGGTTACTTAATTGTTGCCAAGTGAGAGCAGCTCAGCAGTGGGAGTGAGTTTAGTGAGAACGCTGCTCAGAGCATTGAGAGGGAAATGATCCAATTTCACACATATACTAACATGTATACATAGTTATCTAATGCTGCACAATGGAGAACACTTTCACTTATCGAAGGAGTCTTTATGCTACAGGCCGGATTTTCAATGTGGGTAACtgatttcatttcagtttattaaatgttgCCGTTTTTGCATGGCCTCATTGTTTTTGCCAGGTATATTTGGACCTGAGCATCCCTACAGACATTAAACGATTGAATCAAAATGgttgttgttgggtttttttcttttccccaaaCAGTGAAAGACATAAATGTTTGACAGTTCCTCCCTGAATTAATCCTGGTCTTTATGGAGAGCACTGGGTGTGGACATGTTTAGCCTAGATAAACTATTAATAGACCAGGAAGGATATAGTTTGCCTCCTGTTCAAAGCATACAGGCTGCAAACGAGTACCGAACTGTAACTTATCTGACGCACTTGTCAGTTTTGTGCACTCTCCTCTTGCAGTCTTCTTTCCCAATGGAAAAATGCACATACCCGCTGTTCAATGGATGACcttgttgttttcagttcagttgttttcctcttttttttaaaccaggaaGATGTCATAGAAAGTATACATGTGGCTTACAATAAATTGCTCTGACTGGGCTCGGCTTTGAGATGTGATGGGGAATTAGAATTGAAAAAACTAACAACTGAAGtacagatatacactcacctaaaggattattaggaacacctgttcaatttctcattaatgcaattat

Function

NR:

description
PREDICTED: fibronectin type-III domain-containing protein 3A

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU28981 True 2935 lncRNA 0.38 2 15217176 15309751

Neighbor

gene id symbol gene type direction distance location
AMCG00007345 NA coding upstream 44699 15166463 ~ 15172477 (+)
AMCG00007342 ptdss2 coding upstream 200641 14977530 ~ 15016535 (+)
AMCG00007343 NA coding upstream 244939 14945229 ~ 14972237 (+)
AMCG00007341 kcnq1,LOC106562821,LOC105889017,LOC102797067,LOC102292488 coding upstream 324029 14661678 ~ 14893147 (+)
AMCG00007338 kcnq1,LOC106562471,LOC104956027,LOC101161541 coding upstream 557115 14630762 ~ 14660061 (+)
AMCG00007351 hras,LOC107675296,LOC103357265 coding downstream 22857 15332608 ~ 15349542 (+)
AMCG00007354 NA coding downstream 182290 15492041 ~ 15579231 (+)
AMCG00007355 LOC105029471,LOC102789834,LOC107090945,LOC106925402 coding downstream 304044 15613795 ~ 15623775 (+)
AMCG00007356 LOC108275078,LOC108439244,LOC106560719 coding downstream 332144 15641895 ~ 15667423 (+)
AMCG00007357 brsk2b,LOC102314217,LOC102209371,LOC101068155,LOC107696635 coding downstream 369571 15679322 ~ 15691676 (+)
G23100 NA non-coding upstream 192488 15024226 ~ 15024688 (+)
G22979 NA non-coding upstream 926551 14286133 ~ 14290625 (+)
G22962 NA non-coding upstream 1002120 14176735 ~ 14215056 (+)
G22944 NA non-coding upstream 1151532 14065371 ~ 14065644 (+)
G22940 NA non-coding upstream 1151968 14064950 ~ 14065208 (+)
G23154 mob2,LOC108411394 non-coding downstream 360191 15669942 ~ 15753760 (+)
G23189 NA non-coding downstream 721013 16030764 ~ 16067082 (+)
G23263 NA non-coding downstream 842709 16152460 ~ 16157347 (+)
G23294 NA non-coding downstream 983353 16293104 ~ 16296008 (+)
G23322 NA non-coding downstream 1046939 16356690 ~ 16411211 (+)
AMCG00007337 NA other upstream 727484 14478673 ~ 14489692 (+)
AMCG00007307 clg19h11orf96 other upstream 4604072 10611196 ~ 10613104 (+)
AMCG00007278 NA other upstream 5251909 9936920 ~ 9965267 (+)
G22372 NA other upstream 5717448 9436524 ~ 9499728 (+)
AMCG00007253 calcb,LOC106584617,LOC104951332,LOC107090894,LOC106922915,LOC106950942,LOC103461098 other upstream 6505865 8697983 ~ 8711311 (+)
AMCG00007350 tsg101 other downstream 56910 15366661 ~ 15379965 (+)
AMCG00007379 NA other downstream 1314639 16624390 ~ 16662700 (+)
AMCG00007417 NA other downstream 2888867 18198618 ~ 18201960 (+)
G23698 fem1b other downstream 2897327 18207078 ~ 18208308 (+)
AMCG00007414 NA other downstream 2907979 18217730 ~ 18224936 (+)

Expression


Co-expression Network