G23225 (LOC103376870)


Basic Information

Item Value
gene id G23225
gene name LOC103376870
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 15734625 ~ 15800952 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29111
TCTAATTGGCTCCTCTTCCACTAGAAGCTAAGTATTTTGatatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagattttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccattttagtacagtgaactcattgtcatgttcaagaaaccaatttgaaatgattccacctttgtgacatggtgcattatcctgctggaagtagccatcagaggatgggtacatggtggtcataaagggatggacatggta

Function

NR:

description
PREDICTED: uncharacterized protein LOC103376870

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29111 True 443 lncRNA 0.43 2 15734625 15800952

Neighbor

gene id symbol gene type direction distance location
AMCG00007353 LOC107707550,LOC106953705,LOC103466147,LOC101079446,LOC106515651,LOC108239988 coding downstream 349623 15377618 ~ 15385002 (-)
AMCG00007349 NA coding downstream 421192 15288340 ~ 15313433 (-)
AMCG00007348 NA coding downstream 456667 15221097 ~ 15277958 (-)
AMCG00007346 phrf1 coding downstream 524607 15189288 ~ 15210018 (-)
AMCG00007347 NA coding downstream 549645 15176186 ~ 15184980 (-)
AMCG00007361 NA coding upstream 74015 15874967 ~ 15890365 (-)
AMCG00007363 LOC108428835 coding upstream 133195 15934147 ~ 15938530 (-)
AMCG00007362 ptpn5 coding upstream 178361 15979313 ~ 15988623 (-)
AMCG00007364 phlda2,LOC100705395 coding upstream 469015 16269967 ~ 16270377 (-)
AMCG00007374 abtb2b,abtb2,LOC107558307,LOC107675288 coding upstream 584433 16385385 ~ 16444113 (-)
G23105 NA non-coding downstream 603027 15131388 ~ 15131598 (-)
G23101 LOC101154678 non-coding downstream 709880 15024241 ~ 15024745 (-)
G23011 NA non-coding downstream 1254426 14478596 ~ 14480199 (-)
G22971 NA non-coding downstream 1544937 14184702 ~ 14189688 (-)
G22943 NA non-coding downstream 1669327 14063495 ~ 14065298 (-)
G23250 NA non-coding upstream 267131 16068083 ~ 16069464 (-)
G23344 NA non-coding upstream 577566 16378518 ~ 16380291 (-)
G23379 NA non-coding upstream 859929 16660881 ~ 16662665 (-)
G23397 NA non-coding upstream 905337 16706289 ~ 16709180 (-)
G23429 NA non-coding upstream 1147500 16948452 ~ 16948745 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 1701413 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 1788560 13945643 ~ 13946065 (-)
G22838 NA other downstream 2382552 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 5461930 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 5544421 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 436509 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 520045 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 668515 16469467 ~ 16621905 (-)
G23661 NA other upstream 2254518 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 2401507 18202459 ~ 18208020 (-)

Expression


Co-expression Network