G23250


Basic Information

Item Value
gene id G23250
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 16068083 ~ 16069464 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29141
NGAGTTACTGCAGTGGCCTCAGATAATTCAACTGAAGGAGCTGCTGTTAATGTATCTTGCTACACAAAGCCTGGTGTCATTAGGAACCTAACTCTGACTGAAGTCACAACCTCGTCTGTCTCTCTCAACTGGAATGAACCAGAGGGAAACAGATCTTACTTTAGAGTAGAAGTGCTGGAGGCTGGGGCAAATCAAATCGCAAAAAGGACTACGACTGAAACATCCCTGAACGTGACTGGTCTGACTGCTGGGATAAATTACACATTCAGAGTTATTGCAGTGGCCTCAGATAATTCAACTGAAGGATTTGTTGTCACCATTTCTTGCTACACAAGTAAGTCTTCTGTCATTACAGTACCTGGAACTTCACAACAATCCAGTAATGTAACCTCCTTGCACTCATTAATTGACGTTGATCATAGTCCAGTGGCTGAAGTTCTCTGATTGCAGTGACCGTTATGTTTGATGTTATGAATCTCTGTCATGTAATTTTATTCAACCTGGTTTCGACAttgattcatttgttttcttggctCCTGTTATACTAGCACATGCTACACATGATGGTTCAGACCCAATTTTTAGCAACCcttgtaatgattttaatttgcGTGACAGCATGTACTCGAGTCAGGAGTGGGTGTCCCTGGGTCAAGAGCTGGGTAGGGTAGAGAATGCTAGTGTGAAAGTGGCGATTTAAATCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29141 True 704 lncRNA 0.42 2 16068083 16069464

Neighbor

gene id symbol gene type direction distance location
AMCG00007362 ptpn5 coding downstream 79460 15979313 ~ 15988623 (-)
AMCG00007363 LOC108428835 coding downstream 129553 15934147 ~ 15938530 (-)
AMCG00007361 NA coding downstream 177718 15874967 ~ 15890365 (-)
AMCG00007358 mob2,LOC102782240,LOC108411394,LOC106561048 coding downstream 292571 15756293 ~ 15775512 (-)
AMCG00007359 mob2,LOC108411394 coding downstream 311833 15750108 ~ 15756250 (-)
AMCG00007364 phlda2,LOC100705395 coding upstream 200503 16269967 ~ 16270377 (-)
AMCG00007374 abtb2b,abtb2,LOC107558307,LOC107675288 coding upstream 315921 16385385 ~ 16444113 (-)
AMCG00007373 b4galnt4 coding upstream 386069 16455533 ~ 16467687 (-)
AMCG00007376 tmem86a,LOC107707555,LOC107675270,LOC107709947,LOC107688565 coding upstream 596087 16665551 ~ 16670635 (-)
AMCG00007380 LOC103466153,LOC107104254,LOC106927356,LOC106962050,LOC101067251,LOC102221597,LOC107389017 coding upstream 642628 16712092 ~ 16732845 (-)
G23225 LOC103376870 non-coding downstream 267131 15734625 ~ 15800952 (-)
G23105 NA non-coding downstream 936485 15131388 ~ 15131598 (-)
G23101 LOC101154678 non-coding downstream 1043338 15024241 ~ 15024745 (-)
G23011 NA non-coding downstream 1587884 14478596 ~ 14480199 (-)
G22971 NA non-coding downstream 1878395 14184702 ~ 14189688 (-)
G23344 NA non-coding upstream 309054 16378518 ~ 16380291 (-)
G23379 NA non-coding upstream 591417 16660881 ~ 16662665 (-)
G23397 NA non-coding upstream 636825 16706289 ~ 16709180 (-)
G23429 NA non-coding upstream 878988 16948452 ~ 16948745 (-)
G23431 NA non-coding upstream 894503 16963967 ~ 16964267 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 2034871 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 2122018 13945643 ~ 13946065 (-)
G22838 NA other downstream 2716010 13351517 ~ 13352073 (-)
AMCG00007298 NA other downstream 5795388 10265045 ~ 10272695 (-)
AMCG00007289 bet1l,LOC107740886 other downstream 5877879 10187308 ~ 10190204 (-)
AMCG00007366 NA other upstream 167997 16237461 ~ 16314032 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other upstream 251533 16320997 ~ 16345580 (-)
AMCG00007375 NA other upstream 400003 16469467 ~ 16621905 (-)
G23661 NA other upstream 1986006 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 2132995 18202459 ~ 18208020 (-)

Expression


Co-expression Network