G23566


Basic Information

Item Value
gene id G23566
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17581606 ~ 17583440 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29524
ttcaaattttaaatagTCTATTTAATCCAATTCAAGCAGGAGTAAACAAATAGCAATGTGCTTGTCCTGTGTAATAATCATACCATTGTTCAATTTAAGAGATACTCCTCATTCACTAATCACTTTGATACAAGGACTTGAATCCTCACTTTGTTAATTTGCCATTTTGTGTCAGGGGTGAATAATGTACATTGTTTCCCCTTGCTGTTGACATGTGGAAATGTAAGCGGCATCAAGATATAGGATGATAAGTTAGATTGCAATGCACTgaatgcagaaacaaaataagactTTTTAAAGTACTCAAACTTGAGACTTGAACCATTcaagtaaattatatttatgcaaAACTATGTGATCAATGATGCAAAAGGTGTATTTCATGCCCAGAAACAATTTTACCTCCCCAGCATATTTTTTGAAAACCATTTAATACCCCCTTATGACCAGCTGACCCAGTAAGACCTTTGCTCCTCGATGCAGTTTCATAATGGACTTTGAGCTGCACAAGAGGAAAAACAGGACAAAGAACTGAATCAAAGTAAATCCTAcatgaaattgaattaaaaccTGCAGTGAACAAAGGTGCCCTTTGATCAGATAATGAAATTATAATAGACAATTACCTACTACTTAAAAGTTGCACCataaaaaaGAATCTGaggttttaaataaagaaatatagaaagaaattaaaaatccaCATACATGGATTGAAGACTTTGAAATCAGTTTTTAACGGACTATGGAAAATCTacaatttgaagaaaaataaattagtaattaaTGGCTTTGAGAAAGTatgaccatatatatatatatatactgtagtcAGTActgaatttttaatatttttagtcAAAAACATTGGCAAATACTGTCCTATGTAAAAACCTCACATTATGTTGTTTAGAATATGGCAATGTAAAGGAATAACATTTTTCTGTAGATTGGCAATAGGAGCATACTCAACAAATTAAATGACCAAATCTCCTATTTTCTAGATGGGTGACTGATCGAGAGAGAGGATGAAGGGAATTGATCATTTGTTTCCCCATTACCTGGCGCATTCCTCCTTAGGTTGTGCGCAAGGCAGCACAGtttaaagacagacacagacgtCACCACGGCATCAGCGGTGGTCAGGGTTAGGCCGTGGTGACGTCTGTGGCGAGTGCGCACTCACTGGGCTCCGCACAGCTGGAGCAGCACAACTCCATTCAGAGGAGGCTAAATGGGGGCTTCATAACCTTCCACAGGAAAGAGCAGCCAATGATTTGAGattcacaacattttttttttttcctaatataCCATTTACAGTTTGCCTCAAACAGCCCTGATCTTCTTCAGTGTAGATACTGTGGCGGGTGATCCTCTTTCTACTGCAGATACCTcagagcagaaaaaaacaccttaaCACATGGAGTTGTGTGGTTGTTTGCAGCTACTTCCTTCTGACAGAGCAGAGCTGGAGAACAGCTGGTCTGAGGAGGAGCTCTGCGATCCTCAGCACCGTCCTGATCTCCACACCGAAAGCAGGCTGAAGGCACTCCAGTGTGAACCTTCTCCCACTTCTGATTGGTCTACTTAGTCACAAGATAATATGTATCCGTTAACTgaacataatgaaaaaaatgttatttaagaaGAGACTGGAGCATCTCCTGGTGTGTTCCAGCGCTCAGTCGTCAGGCTCCAGGACACATTGCTCCACGATCTCACGGAGGTTCGGGTTCTCCATCGCAGCCGCCACTCTCTCCTTGTCATTGATCTGCTTATTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29524 True 1785 lncRNA 0.39 2 17581606 17583440

Neighbor

gene id symbol gene type direction distance location
AMCG00007399 NA coding downstream 51007 17521789 ~ 17530599 (-)
AMCG00007392 kmt5b,LOC102794872 coding downstream 210350 17353112 ~ 17371256 (-)
AMCG00007393 NA coding downstream 232718 17327340 ~ 17348888 (-)
AMCG00007389 NA coding downstream 343880 17200860 ~ 17237726 (-)
AMCG00007388 NA coding downstream 391168 17186838 ~ 17190438 (-)
AMCG00007401 NA coding upstream 8861 17592301 ~ 17648772 (-)
AMCG00007405 NA coding upstream 240454 17823894 ~ 17848724 (-)
AMCG00007406 kif23,LOC107686310 coding upstream 360331 17943771 ~ 17958062 (-)
AMCG00007411 NA coding upstream 379281 17962721 ~ 17978522 (-)
AMCG00007409 LOC105906560,LOC106562708,LOC106562601 coding upstream 396802 17980242 ~ 17991860 (-)
G23550 NA non-coding downstream 69812 17511524 ~ 17511794 (-)
G23548 NA non-coding downstream 72407 17506509 ~ 17509199 (-)
G23539 NA non-coding downstream 93190 17488120 ~ 17488416 (-)
G23532 NA non-coding downstream 101855 17475218 ~ 17479751 (-)
G23487 NA non-coding downstream 267512 17311969 ~ 17314094 (-)
G23580 NA non-coding upstream 74912 17658352 ~ 17658558 (-)
G23620 NA non-coding upstream 191111 17774551 ~ 17774846 (-)
G23624 NA non-coding upstream 238327 17821767 ~ 17823318 (-)
G23629 NA non-coding upstream 322661 17906101 ~ 17906408 (-)
G23663 NA non-coding upstream 389466 17972906 ~ 18062992 (-)
AMCG00007375 NA other downstream 959701 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 1236026 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 1267574 16237461 ~ 16314032 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 3548394 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 3635541 13945643 ~ 13946065 (-)
G23661 NA other upstream 472030 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 619019 18202459 ~ 18208020 (-)
G23838 NA other upstream 1192920 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 2208261 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 2331706 19915146 ~ 19923153 (-)

Expression


Co-expression Network