G23604


Basic Information

Item Value
gene id G23604
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17821766 ~ 17823337 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29566
TGTACACATCTTCAGTGATGACAAAGTTTGCTACATACTTTGGTGTGAGTTTGAGACTGGATTTCTCAGACAATTGAGCCCAGCTCCCTGGCTGCTTGGACTgaaggggagaaggagagaaataAAACGAGCGAGTAGAAGTCAGACTGAGCTTTTACCGGACCCAGTCCCTGTACAAGAGTTTGAGGGCTTTGTTCCCCCTGCCAGTCGTACAGTAAGTACtcagttttacatttgcatGGCTGTACACACACAGGACAGGGACATGGAGACTGGCAGGGTCAGACGTTCAAATCCAGGGCTGGGCTGACTGTCAGTGAAAGTTCAAATTGATCAAGCGTTTACATAACCAATGCGTCACTCTGACAACGTAAAGGAACCGGCAACAGGCTCTTCTGCTGTTGTCAGGAGGAACTCTGTGGGTCTCAAACACAGGAGAGGTTGAAGTCCCTGCAGAGGGAGGCTGGCTGACCCCTCTGGGTGTCTGGGCCACACTGTGCAGGGGttttaacaaaatcaaacagCGGGACCCTTATAGGTTAGAGTGCTTTACCAGCACTTCAAAGAAAAAACGAAGACCTGAATATTAAATTCTGTTGTATTAAAGCTTCCCATGACACCAGAATCTCCTGAACATGCAAGGGAGGGCTGCCCGACCCAGCCTCTCAATTGggctgtctggttccagaagtGGGGCCTGCAACTCCTCTTGCTCTTCACCACACAATTTCTATATTACTCTATCTGTAATTAAGTGAGAACAGGCATCACTAGACGACTGAACCGCTTGAAAATAGGCCCGACCCCCCGCGAATTCCTGCCGACCAGGAAGAGCCATTCTTACAGGCCGATACAACAGAAGTGGCCCAATCGCTTGCTGCAACACAAGATGTCTGTGCTGACAATACACTGTGATGGGTTCAGTGGTATTCCTGTCTTTATAAGAGGGGGGGTGTACCTGATTTACAAAGGAATTAAAATTGATCAGATTAAACAATTGCCAGCCATTAATCAAACCAAGAGGCTCCAGAAGGACAATCCCACCACATGTGAATTTTCATTTCAGCTAATGAGACATGGGGGAAAGGGCACAGATATGGAGTAGACAGTTATTTAACCAAAATTTTACAATGTTCTTTAATTCACAAAGTTCTCTCACCCCCCCagcccaccccacccccatgtGTCCCTTCAGTATGTATGCGGAGCTCCCTGAGCCAGCTGGCATGACTCCTCCTCCCGCTACACCAACGGGGCCACCGGCTCAGACACGGCAGTCCAGGCAGACCGGCACACTTCCTTTACTGAGCACAGCCCGACACCCTTCACCATGAAAGGTTTGGCCGTGTATATCCAAGTTATCCAAAAGCACAtccataaaaaaatgcaaataaaatctcTGCATCAGTCCGGATTCCATAaattgttggaaaaaaaaaaaaaaaaaatcagaataaaaATCTCACGATCTCGGGGAACGACAGCCTGGATCGGAAAAATCAATCCCCTTCCATCTGCAGCGACAGTGGACGATCGAGAAAACCATCACGACT
>TU29567
TGTACACATCTTCAGTGATGACAAAGTTTGCTACATACTTTGGTGTGAGTTTGAGACTGGATTTCTCAGACAATTGAGCCCAGCTCCCTGGCTGCTTGGACTgaaggggagaaggagagaaataAAACGAGCGAGTAGAAGTCAGACTGAGCTTTTACCGGACCCAGTCCCTGTACAAGAGTTTGAGGGCTTTGTTCCCCCTGCCAGTCGTACAGTAAGTACtcagttttacatttgcatGGCTGTACACACACAGGACAGGGACATGGAGACTGGCAGGGTCAGACGTTCAAATCCAGGGCTGGGCTGACTGTCAGTGAAAGTTCAAATTGATCAAGCGTTTACATAACCAATGCGTCACTCTGACAACGTAAAGGAACCGGCAACAGGCTCTTCTGCTGTTGTCAGGAGGAACTCTGTGGGTCTCAAACACAGGAGAGGTTGAAGTCCCTGCAGAGGGAGGCTGGCTGACCCCTCTGGGTGTCTGGGCCACACTGTGCAGGGGttttaacaaaatcaaacagCGGGACCCTTATAGGTTAGAGTGCTTTACCAGCACTTCAAAGAAAAAACGAAGACCTGAATATTAAATTCTGTTGTATTAAAGCTTCCCATGACACCAGAATCTCCTGAACATGCAAGGGAGGGCTGCCCGACCCAGCCTCTCAATTGggctgtctggttccagaagtGGGGCCTGCAACTCCTCTTGCTCTTCACCACACAATTTCTATATTACTCTATCTGTAATTAAGTGAGAACAGGCATCACTAGACGACTGAACCGCTTGAAAATAGGCCCGACCCCCCGCGAATTCCTGCCGACCAGGAAGAGCCATTCTTACAGGCCGATACAACAGAAGTGGCCCAATCGCTTGCTGCAACACAAGATGTCTGTGCTGACAATACACTGTGATGGGTTCAGTGGTATTCCTGTCTTTATAAGAGGGGGGGTGTACCTGATTTACAAAGGAATTAAAATTGATCAGATTAAACAATTGCCAGCCATTAATCAAACCAAGAGGCTCCAGAAGGACAATCCCACCACATGTGAATTTTCATTTCAGCTAATGAGACATGGGGGAAAGGGCACAGATATGGAGTAGACAGTTATTTAACCAAAATTTTACAATGTTCTTTAATTCACAAAGTTCTCTCACCCCCCCagcccaccccacccccatgtGTCCCTTCAGTATGTATGCGGAGCTCCCTGAGCCAGCTGGCATGACTCCTCCTCCCGCTACACCAACGGGGCCACCGGCTCAGACACGGCAGTCCAGGCAGACCGGCACACTTCCTTTACTGAGCACAGCCCGACACCCTTCACCATGAAAGGTTTGGCCGTGTATATCCAAGTTATCCAAAAGCACAtccataaaaaaatgcaaataaaatctcTGCATCAGTCCGGATTCCATAaattgttggaaaaaaaaaaaaaaaaaatcagaataaaaATCTCACGATCTCGGGGAACGACAGCCTGGATCGGAAAAATCAATCCCCTTCCATCTGCAGCGACAGTGGACGATCGAGAAAACCATCACGACTGTACCATGACACGCAAATT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29566 False 1553 lncRNA 0.48 1 17821766 17823318
TU29567 True 1572 lncRNA 0.48 1 17821766 17823337

Neighbor

gene id symbol gene type direction distance location
AMCG00007404 NA coding upstream 92487 17701160 ~ 17729279 (+)
AMCG00007403 morf4l1,LOC107596963,LOC107686360,LOC107738770 coding upstream 146212 17659682 ~ 17675554 (+)
AMCG00007402 LOC105013640 coding upstream 168954 17651631 ~ 17652812 (+)
AMCG00007400 NA coding upstream 238326 17578259 ~ 17583440 (+)
AMCG00007395 NA coding upstream 250216 17560978 ~ 17571550 (+)
AMCG00007407 anp32a,LOC107700478,LOC107740437,LOC107557695 coding downstream 230758 18054095 ~ 18058956 (+)
AMCG00007408 NA coding downstream 238897 18062234 ~ 18063493 (+)
AMCG00007416 NA coding downstream 345113 18168450 ~ 18198526 (+)
AMCG00007415 LOC104955851 coding downstream 386291 18209628 ~ 18216895 (+)
AMCG00007428 NA coding downstream 574010 18397347 ~ 18402499 (+)
G23610 NA non-coding upstream 649 17820847 ~ 17821117 (+)
G23540 NA non-coding upstream 330005 17491445 ~ 17491761 (+)
G23538 NA non-coding upstream 334366 17487117 ~ 17487400 (+)
G23515 NA non-coding upstream 342017 17474963 ~ 17479749 (+)
G23497 NA non-coding upstream 468976 17352572 ~ 17352790 (+)
G23628 NA non-coding downstream 81221 17904558 ~ 17904949 (+)
G23631 NA non-coding downstream 119439 17942776 ~ 17943110 (+)
G23634 NA non-coding downstream 129214 17952551 ~ 17953275 (+)
G23642 anp32a,LOC107755092,LOC107700478,LOC107557695,LOC107740437 non-coding downstream 226806 18050143 ~ 18062904 (+)
G23696 NA non-coding downstream 379125 18202462 ~ 18204361 (+)
AMCG00007379 NA other upstream 1159066 16624390 ~ 16662700 (+)
AMCG00007350 tsg101 other upstream 2441801 15366661 ~ 15379965 (+)
AMCG00007352 NA other upstream 2533806 15276711 ~ 15287960 (+)
AMCG00007337 NA other upstream 3332074 14478673 ~ 14489692 (+)
AMCG00007307 clg19h11orf96 other upstream 7208662 10611196 ~ 10613104 (+)
AMCG00007417 NA other downstream 375281 18198618 ~ 18201960 (+)
G23698 fem1b other downstream 383741 18207078 ~ 18208308 (+)
AMCG00007414 NA other downstream 394393 18217730 ~ 18224936 (+)
G23724 NA other downstream 466771 18290108 ~ 18292338 (+)
AMCG00007433 NA other downstream 743905 18567242 ~ 18570472 (+)

Expression


Co-expression Network