G23610


Basic Information

Item Value
gene id G23610
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17820847 ~ 17821117 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29573
CAGCACACAAGGAGGAGAGATGTCATTGATGAGAGCAGGCAGTCACACGCAGATTTACAGGCAGGCCTTCGGAGGTGAGAGGGAGCCCTAATTAGCCCACTGCACCACTCATGCACCCTGGCATTATTTTCCATCAGTCCTCAGAAGGTGCAAATTTGTGTAGCTACAACTATGTCAAACTCAAGATGCAAATGACCCTCTTTTGATTCTCAGAAACCGTGTCACAGAGCAGGGATGCAGCTTTCTTTTCtagaaattaaagcacttatTT

Function

GO: NA

KEGG:

id description
ko02010 ABC transporters
ko04976 Bile secretion
ko04975 Fat digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU29573 True 271 lncRNA 0.46 1 17820847 17821117

Neighbor

gene id symbol gene type direction distance location
AMCG00007404 NA coding upstream 91568 17701160 ~ 17729279 (+)
AMCG00007403 morf4l1,LOC107596963,LOC107686360,LOC107738770 coding upstream 145293 17659682 ~ 17675554 (+)
AMCG00007402 LOC105013640 coding upstream 168035 17651631 ~ 17652812 (+)
AMCG00007400 NA coding upstream 237407 17578259 ~ 17583440 (+)
AMCG00007395 NA coding upstream 249297 17560978 ~ 17571550 (+)
AMCG00007407 anp32a,LOC107700478,LOC107740437,LOC107557695 coding downstream 232978 18054095 ~ 18058956 (+)
AMCG00007408 NA coding downstream 241117 18062234 ~ 18063493 (+)
AMCG00007416 NA coding downstream 347333 18168450 ~ 18198526 (+)
AMCG00007415 LOC104955851 coding downstream 388511 18209628 ~ 18216895 (+)
AMCG00007428 NA coding downstream 576230 18397347 ~ 18402499 (+)
G23540 NA non-coding upstream 329086 17491445 ~ 17491761 (+)
G23538 NA non-coding upstream 333447 17487117 ~ 17487400 (+)
G23515 NA non-coding upstream 341098 17474963 ~ 17479749 (+)
G23497 NA non-coding upstream 468057 17352572 ~ 17352790 (+)
G23449 NA non-coding upstream 772529 17047930 ~ 17048318 (+)
G23604 NA non-coding downstream 649 17821766 ~ 17823337 (+)
G23628 NA non-coding downstream 83441 17904558 ~ 17904949 (+)
G23631 NA non-coding downstream 121659 17942776 ~ 17943110 (+)
G23634 NA non-coding downstream 131434 17952551 ~ 17953275 (+)
G23642 anp32a,LOC107755092,LOC107700478,LOC107557695,LOC107740437 non-coding downstream 229026 18050143 ~ 18062904 (+)
AMCG00007379 NA other upstream 1158147 16624390 ~ 16662700 (+)
AMCG00007350 tsg101 other upstream 2440882 15366661 ~ 15379965 (+)
AMCG00007352 NA other upstream 2532887 15276711 ~ 15287960 (+)
AMCG00007337 NA other upstream 3331155 14478673 ~ 14489692 (+)
AMCG00007307 clg19h11orf96 other upstream 7207743 10611196 ~ 10613104 (+)
AMCG00007417 NA other downstream 377501 18198618 ~ 18201960 (+)
G23698 fem1b other downstream 385961 18207078 ~ 18208308 (+)
AMCG00007414 NA other downstream 396613 18217730 ~ 18224936 (+)
G23724 NA other downstream 468991 18290108 ~ 18292338 (+)
AMCG00007433 NA other downstream 746125 18567242 ~ 18570472 (+)

Expression


Co-expression Network