G23620


Basic Information

Item Value
gene id G23620
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030123.1
NCBI id CM030123.1
chromosome length 53548854
location 17774551 ~ 17774846 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU29583
GTTGCACGCGCGGTTTCGCAATTCTCCCCTTGTCGGACCCCTGTGCAGCGCCGATGTTTCTGGCTTTAGCTTTCCACTCTATTCGAGCCAGCACCTGATCTAGTTCACCCTCCAGCTGCAACGGTTCCGGGACTTTCTTTCTCACGACTATCCCGTCGCAGCTGGAGGGGGGGCCGGTTCTCACCTGCGAGACGGTCTCAGCTACGGTGTCCTTCGACCCGGCTCCCGAGGCTCTGCTCTCCAAGGCGggtctatttttcttttcagggggCCGGTCCACCACGGCGGGGCCCGAT

Function

GO:

id name namespace
GO:0002011 morphogenesis of an epithelial sheet biological_process
GO:0055113 epiboly involved in gastrulation with mouth forming second biological_process
GO:0090504 epiboly biological_process
GO:0001702 gastrulation with mouth forming second biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU29583 True 296 lncRNA 0.61 1 17774551 17774846

Neighbor

gene id symbol gene type direction distance location
AMCG00007401 NA coding downstream 125779 17592301 ~ 17648772 (-)
AMCG00007399 NA coding downstream 243952 17521789 ~ 17530599 (-)
AMCG00007392 kmt5b,LOC102794872 coding downstream 403295 17353112 ~ 17371256 (-)
AMCG00007393 NA coding downstream 425663 17327340 ~ 17348888 (-)
AMCG00007389 NA coding downstream 536825 17200860 ~ 17237726 (-)
AMCG00007405 NA coding upstream 49048 17823894 ~ 17848724 (-)
AMCG00007406 kif23,LOC107686310 coding upstream 168925 17943771 ~ 17958062 (-)
AMCG00007411 NA coding upstream 187875 17962721 ~ 17978522 (-)
AMCG00007409 LOC105906560,LOC106562708,LOC106562601 coding upstream 205396 17980242 ~ 17991860 (-)
AMCG00007412 LOC107100407 coding upstream 263989 18038835 ~ 18048218 (-)
G23580 NA non-coding downstream 115993 17658352 ~ 17658558 (-)
G23566 NA non-coding downstream 191111 17581606 ~ 17583440 (-)
G23550 NA non-coding downstream 262757 17511524 ~ 17511794 (-)
G23548 NA non-coding downstream 265352 17506509 ~ 17509199 (-)
G23539 NA non-coding downstream 286135 17488120 ~ 17488416 (-)
G23624 NA non-coding upstream 46921 17821767 ~ 17823318 (-)
G23629 NA non-coding upstream 131255 17906101 ~ 17906408 (-)
G23663 NA non-coding upstream 198060 17972906 ~ 18062992 (-)
G23676 NA non-coding upstream 297209 18072055 ~ 18074005 (-)
G23745 NA non-coding upstream 539305 18314151 ~ 18403277 (-)
AMCG00007375 NA other downstream 1152646 16469467 ~ 16621905 (-)
AMCG00007365 cars,LOC107578099,LOC102789774 other downstream 1428971 16320997 ~ 16345580 (-)
AMCG00007366 NA other downstream 1460519 16237461 ~ 16314032 (-)
AMCG00007326 pamr1,LOC107570358,LOC107710987,LOC107685072 other downstream 3741339 13981374 ~ 14033212 (-)
G22931 LOC100846954 other downstream 3828486 13945643 ~ 13946065 (-)
G23661 NA other upstream 280624 18055470 ~ 18058949 (-)
AMCG00007418 fem1b other upstream 427613 18202459 ~ 18208020 (-)
G23838 NA other upstream 1001514 18776360 ~ 18777638 (-)
AMCG00007481 fam63b,LOC107750498 other upstream 2016855 19791701 ~ 19799752 (-)
AMCG00007487 NA other upstream 2140300 19915146 ~ 19923153 (-)

Expression


Co-expression Network